Experiment: L-Lysine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS10905 and BWI76_RS10910 are separated by 301 nucleotides BWI76_RS10910 and BWI76_RS10915 are separated by 89 nucleotides BWI76_RS10915 and BWI76_RS10920 are separated by 88 nucleotides BWI76_RS10920 and BWI76_RS10925 are separated by 36 nucleotides
BWI76_RS10905: BWI76_RS10905 - hypothetical protein, at 2,303,769 to 2,304,263
_RS10905
BWI76_RS10910: BWI76_RS10910 - hypothetical protein, at 2,304,565 to 2,304,870
_RS10910
BWI76_RS10915: BWI76_RS10915 - O-acetyl-ADP-ribose deacetylase, at 2,304,960 to 2,305,514
_RS10915
BWI76_RS10920: BWI76_RS10920 - putative TetR family transcriptional regulator, at 2,305,603 to 2,306,151
_RS10920
BWI76_RS10925: BWI76_RS10925 - glucans biosynthesis protein C, at 2,306,188 to 2,307,348
_RS10925
Position (kb)
2304
2305
2306 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2304.027 kb on + strand, within BWI76_RS10905 at 2304.056 kb on - strand, within BWI76_RS10905 at 2304.163 kb on - strand, within BWI76_RS10905 at 2304.209 kb on + strand, within BWI76_RS10905 at 2304.289 kb on + strand at 2304.303 kb on + strand at 2304.312 kb on - strand at 2304.342 kb on - strand at 2304.517 kb on - strand at 2304.547 kb on + strand at 2304.557 kb on + strand at 2304.565 kb on - strand at 2304.609 kb on + strand, within BWI76_RS10910 at 2304.617 kb on - strand, within BWI76_RS10910 at 2304.623 kb on + strand, within BWI76_RS10910 at 2304.704 kb on - strand at 2304.847 kb on + strand at 2304.847 kb on + strand at 2304.855 kb on - strand at 2304.865 kb on + strand at 2304.865 kb on + strand at 2304.865 kb on + strand at 2304.871 kb on + strand at 2304.941 kb on + strand at 2304.971 kb on + strand at 2304.971 kb on + strand at 2305.095 kb on - strand, within BWI76_RS10915 at 2305.114 kb on - strand, within BWI76_RS10915 at 2305.130 kb on + strand, within BWI76_RS10915 at 2305.138 kb on - strand, within BWI76_RS10915 at 2305.155 kb on - strand, within BWI76_RS10915 at 2305.350 kb on - strand, within BWI76_RS10915 at 2305.417 kb on - strand, within BWI76_RS10915 at 2305.515 kb on - strand at 2305.631 kb on - strand at 2305.631 kb on - strand at 2305.644 kb on + strand at 2305.682 kb on + strand, within BWI76_RS10920 at 2305.694 kb on + strand, within BWI76_RS10920 at 2305.809 kb on - strand, within BWI76_RS10920 at 2305.932 kb on - strand, within BWI76_RS10920 at 2306.156 kb on + strand at 2306.176 kb on - strand at 2306.325 kb on + strand, within BWI76_RS10925 at 2306.366 kb on + strand, within BWI76_RS10925 at 2306.366 kb on + strand, within BWI76_RS10925 at 2306.366 kb on + strand, within BWI76_RS10925 at 2306.374 kb on - strand, within BWI76_RS10925 at 2306.374 kb on - strand, within BWI76_RS10925 at 2306.374 kb on - strand, within BWI76_RS10925 at 2306.374 kb on - strand, within BWI76_RS10925 at 2306.391 kb on + strand, within BWI76_RS10925 at 2306.431 kb on + strand, within BWI76_RS10925
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lysine (N) remove 2,304,027 + BWI76_RS10905 0.52 -0.3 2,304,056 - BWI76_RS10905 0.58 -2.0 2,304,163 - BWI76_RS10905 0.80 -1.4 2,304,209 + BWI76_RS10905 0.89 +0.7 2,304,289 + +0.4 2,304,303 + -0.1 2,304,312 - -0.1 2,304,342 - +0.6 2,304,517 - +0.1 2,304,547 + +0.6 2,304,557 + -2.3 2,304,565 - -0.1 2,304,609 + BWI76_RS10910 0.14 +0.6 2,304,617 - BWI76_RS10910 0.17 +0.9 2,304,623 + BWI76_RS10910 0.19 -0.9 2,304,704 - +1.9 2,304,847 + -0.6 2,304,847 + -1.4 2,304,855 - -0.6 2,304,865 + -1.7 2,304,865 + +0.6 2,304,865 + +0.1 2,304,871 + +1.7 2,304,941 + +0.2 2,304,971 + -0.1 2,304,971 + -0.4 2,305,095 - BWI76_RS10915 0.24 -0.8 2,305,114 - BWI76_RS10915 0.28 -0.3 2,305,130 + BWI76_RS10915 0.31 -0.3 2,305,138 - BWI76_RS10915 0.32 +0.5 2,305,155 - BWI76_RS10915 0.35 -0.9 2,305,350 - BWI76_RS10915 0.70 -0.7 2,305,417 - BWI76_RS10915 0.82 -0.5 2,305,515 - -0.1 2,305,631 - +1.2 2,305,631 - +0.5 2,305,644 + +0.2 2,305,682 + BWI76_RS10920 0.14 +1.3 2,305,694 + BWI76_RS10920 0.17 +0.7 2,305,809 - BWI76_RS10920 0.38 -1.6 2,305,932 - BWI76_RS10920 0.60 -1.7 2,306,156 + +0.6 2,306,176 - +1.4 2,306,325 + BWI76_RS10925 0.12 -1.1 2,306,366 + BWI76_RS10925 0.15 +0.0 2,306,366 + BWI76_RS10925 0.15 -0.9 2,306,366 + BWI76_RS10925 0.15 -0.2 2,306,374 - BWI76_RS10925 0.16 +0.2 2,306,374 - BWI76_RS10925 0.16 -0.3 2,306,374 - BWI76_RS10925 0.16 +3.4 2,306,374 - BWI76_RS10925 0.16 -0.0 2,306,391 + BWI76_RS10925 0.17 -0.1 2,306,431 + BWI76_RS10925 0.21 -0.3
Or see this region's nucleotide sequence