Experiment: 7 day starvation, 30C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_3059 and DvMF_3060 are separated by 233 nucleotides DvMF_3060 and DvMF_3061 are separated by 359 nucleotides
DvMF_3059: DvMF_3059 - hypothetical protein (RefSeq), at 3,861,624 to 3,862,022
_3059
DvMF_3060: DvMF_3060 - methyl-accepting chemotaxis sensory transducer (RefSeq), at 3,862,256 to 3,864,235
_3060
DvMF_3061: DvMF_3061 - ABC transporter related (RefSeq), at 3,864,595 to 3,866,586
_3061
Position (kb)
3862
3863
3864
3865 Strain fitness (log2 ratio)
-1
0
1
2 at 3861.400 kb on - strand at 3861.468 kb on + strand at 3861.576 kb on + strand at 3862.027 kb on - strand at 3862.289 kb on - strand at 3862.298 kb on + strand at 3862.716 kb on + strand, within DvMF_3060 at 3863.176 kb on + strand, within DvMF_3060 at 3863.176 kb on + strand, within DvMF_3060 at 3863.184 kb on - strand, within DvMF_3060 at 3863.257 kb on + strand, within DvMF_3060 at 3863.319 kb on - strand, within DvMF_3060 at 3863.479 kb on - strand, within DvMF_3060 at 3863.531 kb on - strand, within DvMF_3060 at 3863.630 kb on + strand, within DvMF_3060 at 3863.630 kb on + strand, within DvMF_3060 at 3863.684 kb on + strand, within DvMF_3060 at 3863.692 kb on + strand, within DvMF_3060 at 3863.861 kb on - strand, within DvMF_3060 at 3863.902 kb on + strand, within DvMF_3060 at 3864.250 kb on - strand at 3864.664 kb on - strand at 3864.841 kb on + strand, within DvMF_3061 at 3864.849 kb on - strand, within DvMF_3061 at 3864.976 kb on - strand, within DvMF_3061
Per-strain Table
Position Strand Gene LocusTag Fraction 7 day starvation, 30C remove 3,861,400 - +1.2 3,861,468 + +1.3 3,861,576 + +0.1 3,862,027 - -0.7 3,862,289 - +0.3 3,862,298 + +0.6 3,862,716 + DvMF_3060 0.23 +0.7 3,863,176 + DvMF_3060 0.46 -0.1 3,863,176 + DvMF_3060 0.46 +0.6 3,863,184 - DvMF_3060 0.47 +0.8 3,863,257 + DvMF_3060 0.51 +0.8 3,863,319 - DvMF_3060 0.54 +0.4 3,863,479 - DvMF_3060 0.62 -0.4 3,863,531 - DvMF_3060 0.64 +1.1 3,863,630 + DvMF_3060 0.69 +0.8 3,863,630 + DvMF_3060 0.69 +0.1 3,863,684 + DvMF_3060 0.72 +0.7 3,863,692 + DvMF_3060 0.73 +0.3 3,863,861 - DvMF_3060 0.81 +0.5 3,863,902 + DvMF_3060 0.83 +1.0 3,864,250 - +0.2 3,864,664 - +0.8 3,864,841 + DvMF_3061 0.12 +1.0 3,864,849 - DvMF_3061 0.13 +1.8 3,864,976 - DvMF_3061 0.19 +1.4
Or see this region's nucleotide sequence