Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2014

Experiment: 7 day starvation, 30C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7 day starvation, 30C
2,492,219	+		DvMF_2013	0.45	+0.6
2,492,265	+		DvMF_2013	0.48	+0.5
2,492,331	-		DvMF_2013	0.54	+0.4
2,492,537	-		DvMF_2013	0.70	+0.3
2,492,560	-		DvMF_2013	0.72	+0.5
2,492,582	+		DvMF_2013	0.73	+0.8
2,492,634	-		DvMF_2013	0.78	-0.4
2,492,651	+		DvMF_2013	0.79	-0.0
2,492,852	+				+0.0
2,492,857	+				+0.2
2,492,910	-				+0.0
2,492,987	+				-0.4
2,493,091	+				-1.1
2,493,109	+				-1.0
2,493,114	+				+0.5
2,493,170	+				-0.8
2,493,277	-	flhA	DvMF_2014	0.14	-1.0
2,493,353	-	flhA	DvMF_2014	0.17	-1.9
2,493,746	-	flhA	DvMF_2014	0.36	-1.3
2,493,750	+	flhA	DvMF_2014	0.36	-1.0
2,493,808	+	flhA	DvMF_2014	0.39	-0.4
2,493,833	-	flhA	DvMF_2014	0.40	+1.2
2,493,833	-	flhA	DvMF_2014	0.40	-0.6
2,493,835	+	flhA	DvMF_2014	0.40	-0.7
2,493,883	+	flhA	DvMF_2014	0.43	-0.7
2,494,074	+	flhA	DvMF_2014	0.52	-0.9
2,494,137	-	flhA	DvMF_2014	0.55	-0.7
2,494,160	-	flhA	DvMF_2014	0.56	-1.0
2,494,375	-	flhA	DvMF_2014	0.66	-0.0
2,494,403	-	flhA	DvMF_2014	0.67	-0.5
2,494,508	-	flhA	DvMF_2014	0.72	+0.8
2,494,508	-	flhA	DvMF_2014	0.72	-1.0
2,494,589	-	flhA	DvMF_2014	0.76	-0.5
2,494,808	+	flhA	DvMF_2014	0.86	-0.9
2,494,848	-	flhA	DvMF_2014	0.88	-1.0
2,494,852	+	flhA	DvMF_2014	0.88	-0.8
2,495,208	+				-2.0
2,495,208	+				-0.7
2,495,216	-				-0.7
2,495,346	+	flhB	DvMF_2015	0.18	+0.0
2,495,346	+	flhB	DvMF_2015	0.18	+0.1
2,495,354	-	flhB	DvMF_2015	0.19	+0.3
2,495,416	+	flhB	DvMF_2015	0.25	-0.0
2,495,877	-	flhB	DvMF_2015	0.68	+0.8