Experiment: 7 day starvation, 30C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1161 and DvMF_1162 are separated by 119 nucleotides DvMF_1162 and DvMF_1163 overlap by 1 nucleotides
DvMF_1161: DvMF_1161 - Hemolysin-type calcium-binding region (RefSeq), at 1,429,589 to 1,437,202
_1161
DvMF_1162: DvMF_1162 - ABC transporter related (RefSeq), at 1,437,322 to 1,438,047
_1162
DvMF_1163: DvMF_1163 - ABC transporter related (RefSeq), at 1,438,047 to 1,438,814
_1163
Position (kb)
1429
1430
1431
1432
1433
1434
1435
1436
1437
1438 Strain fitness (log2 ratio)
-1
0
1
2 at 1428.617 kb on - strand at 1428.837 kb on + strand at 1428.942 kb on + strand at 1429.191 kb on - strand at 1429.333 kb on + strand at 1429.500 kb on - strand at 1429.774 kb on - strand at 1430.151 kb on - strand at 1430.331 kb on + strand at 1430.467 kb on - strand, within DvMF_1161 at 1430.496 kb on + strand, within DvMF_1161 at 1430.504 kb on - strand, within DvMF_1161 at 1430.504 kb on - strand, within DvMF_1161 at 1430.566 kb on - strand, within DvMF_1161 at 1430.605 kb on - strand, within DvMF_1161 at 1430.700 kb on - strand, within DvMF_1161 at 1430.725 kb on + strand, within DvMF_1161 at 1430.906 kb on - strand, within DvMF_1161 at 1430.938 kb on - strand, within DvMF_1161 at 1431.072 kb on + strand, within DvMF_1161 at 1431.192 kb on + strand, within DvMF_1161 at 1431.200 kb on - strand, within DvMF_1161 at 1431.407 kb on + strand, within DvMF_1161 at 1431.482 kb on - strand, within DvMF_1161 at 1431.538 kb on + strand, within DvMF_1161 at 1431.546 kb on - strand, within DvMF_1161 at 1431.563 kb on + strand, within DvMF_1161 at 1431.607 kb on + strand, within DvMF_1161 at 1431.629 kb on + strand, within DvMF_1161 at 1431.673 kb on + strand, within DvMF_1161 at 1431.860 kb on - strand, within DvMF_1161 at 1431.874 kb on - strand, within DvMF_1161 at 1431.958 kb on - strand, within DvMF_1161 at 1432.045 kb on - strand, within DvMF_1161 at 1432.403 kb on + strand, within DvMF_1161 at 1432.469 kb on - strand, within DvMF_1161 at 1432.587 kb on - strand, within DvMF_1161 at 1432.603 kb on + strand, within DvMF_1161 at 1432.757 kb on + strand, within DvMF_1161 at 1432.951 kb on - strand, within DvMF_1161 at 1433.101 kb on + strand, within DvMF_1161 at 1433.542 kb on - strand, within DvMF_1161 at 1433.570 kb on - strand, within DvMF_1161 at 1433.725 kb on - strand, within DvMF_1161 at 1433.886 kb on + strand, within DvMF_1161 at 1433.886 kb on + strand, within DvMF_1161 at 1433.886 kb on + strand, within DvMF_1161 at 1433.894 kb on - strand, within DvMF_1161 at 1433.894 kb on - strand, within DvMF_1161 at 1433.894 kb on - strand, within DvMF_1161 at 1433.894 kb on - strand, within DvMF_1161 at 1434.025 kb on - strand, within DvMF_1161 at 1434.035 kb on - strand, within DvMF_1161 at 1434.434 kb on - strand, within DvMF_1161 at 1434.523 kb on - strand, within DvMF_1161 at 1434.534 kb on + strand, within DvMF_1161 at 1434.547 kb on + strand at 1434.555 kb on - strand, within DvMF_1161 at 1434.599 kb on - strand, within DvMF_1161 at 1434.694 kb on + strand, within DvMF_1161 at 1434.779 kb on - strand, within DvMF_1161 at 1435.015 kb on - strand, within DvMF_1161 at 1435.038 kb on + strand, within DvMF_1161 at 1435.409 kb on - strand, within DvMF_1161 at 1435.559 kb on - strand, within DvMF_1161 at 1435.637 kb on - strand, within DvMF_1161 at 1435.775 kb on + strand, within DvMF_1161 at 1435.778 kb on - strand, within DvMF_1161 at 1435.939 kb on - strand, within DvMF_1161 at 1435.998 kb on - strand, within DvMF_1161 at 1436.004 kb on + strand, within DvMF_1161 at 1436.217 kb on - strand, within DvMF_1161 at 1436.304 kb on - strand, within DvMF_1161 at 1436.368 kb on - strand, within DvMF_1161 at 1436.472 kb on - strand at 1436.703 kb on - strand at 1436.732 kb on - strand at 1437.209 kb on + strand at 1437.272 kb on + strand at 1437.335 kb on - strand at 1437.536 kb on + strand, within DvMF_1162 at 1437.910 kb on + strand, within DvMF_1162
Per-strain Table
Position Strand Gene LocusTag Fraction 7 day starvation, 30C remove 1,428,617 - +1.6 1,428,837 + +1.8 1,428,942 + +1.0 1,429,191 - -0.2 1,429,333 + +0.4 1,429,500 - -0.4 1,429,774 - +0.4 1,430,151 - +0.6 1,430,331 + +0.6 1,430,467 - DvMF_1161 0.12 +0.1 1,430,496 + DvMF_1161 0.12 +0.1 1,430,504 - DvMF_1161 0.12 +0.1 1,430,504 - DvMF_1161 0.12 +0.5 1,430,566 - DvMF_1161 0.13 +0.6 1,430,605 - DvMF_1161 0.13 +0.5 1,430,700 - DvMF_1161 0.15 +1.5 1,430,725 + DvMF_1161 0.15 +1.7 1,430,906 - DvMF_1161 0.17 +0.8 1,430,938 - DvMF_1161 0.18 +0.6 1,431,072 + DvMF_1161 0.19 +0.4 1,431,192 + DvMF_1161 0.21 +0.4 1,431,200 - DvMF_1161 0.21 +0.5 1,431,407 + DvMF_1161 0.24 +0.4 1,431,482 - DvMF_1161 0.25 +2.4 1,431,538 + DvMF_1161 0.26 +0.6 1,431,546 - DvMF_1161 0.26 +0.8 1,431,563 + DvMF_1161 0.26 +0.6 1,431,607 + DvMF_1161 0.27 +0.6 1,431,629 + DvMF_1161 0.27 +0.3 1,431,673 + DvMF_1161 0.27 +0.5 1,431,860 - DvMF_1161 0.30 -0.0 1,431,874 - DvMF_1161 0.30 +0.9 1,431,958 - DvMF_1161 0.31 +0.3 1,432,045 - DvMF_1161 0.32 +0.8 1,432,403 + DvMF_1161 0.37 +0.5 1,432,469 - DvMF_1161 0.38 +0.8 1,432,587 - DvMF_1161 0.39 +0.3 1,432,603 + DvMF_1161 0.40 +0.3 1,432,757 + DvMF_1161 0.42 +0.6 1,432,951 - DvMF_1161 0.44 -0.2 1,433,101 + DvMF_1161 0.46 +0.6 1,433,542 - DvMF_1161 0.52 +0.8 1,433,570 - DvMF_1161 0.52 -0.0 1,433,725 - DvMF_1161 0.54 +0.1 1,433,886 + DvMF_1161 0.56 +0.7 1,433,886 + DvMF_1161 0.56 +0.1 1,433,886 + DvMF_1161 0.56 +0.1 1,433,894 - DvMF_1161 0.57 +1.0 1,433,894 - DvMF_1161 0.57 +0.5 1,433,894 - DvMF_1161 0.57 +0.6 1,433,894 - DvMF_1161 0.57 +0.3 1,434,025 - DvMF_1161 0.58 -1.1 1,434,035 - DvMF_1161 0.58 +1.0 1,434,434 - DvMF_1161 0.64 +0.4 1,434,523 - DvMF_1161 0.65 +1.0 1,434,534 + DvMF_1161 0.65 +0.1 1,434,547 + +0.6 1,434,555 - DvMF_1161 0.65 +0.2 1,434,599 - DvMF_1161 0.66 +1.2 1,434,694 + DvMF_1161 0.67 +0.1 1,434,779 - DvMF_1161 0.68 +0.3 1,435,015 - DvMF_1161 0.71 +0.6 1,435,038 + DvMF_1161 0.72 +0.6 1,435,409 - DvMF_1161 0.76 +0.5 1,435,559 - DvMF_1161 0.78 +0.0 1,435,637 - DvMF_1161 0.79 +0.4 1,435,775 + DvMF_1161 0.81 -0.4 1,435,778 - DvMF_1161 0.81 -0.1 1,435,939 - DvMF_1161 0.83 -0.4 1,435,998 - DvMF_1161 0.84 +0.4 1,436,004 + DvMF_1161 0.84 +0.5 1,436,217 - DvMF_1161 0.87 +1.0 1,436,304 - DvMF_1161 0.88 +0.6 1,436,368 - DvMF_1161 0.89 +0.4 1,436,472 - +0.6 1,436,703 - +0.4 1,436,732 - +1.2 1,437,209 + +0.2 1,437,272 + +1.5 1,437,335 - +0.4 1,437,536 + DvMF_1162 0.29 +0.6 1,437,910 + DvMF_1162 0.81 +0.0
Or see this region's nucleotide sequence