Experiment: 7 day starvation, 30C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1067 and DvMF_1068 are separated by 77 nucleotides DvMF_1068 and DvMF_1069 are separated by 74 nucleotides DvMF_1069 and DvMF_1070 are separated by 19 nucleotides DvMF_1070 and DvMF_1071 are separated by 84 nucleotides
DvMF_1067: DvMF_1067 - hypothetical protein (RefSeq), at 1,308,427 to 1,309,047
_1067
DvMF_1068: DvMF_1068 - hypothetical protein (RefSeq), at 1,309,125 to 1,309,523
_1068
DvMF_1069: DvMF_1069 - hypothetical protein (RefSeq), at 1,309,598 to 1,310,512
_1069
DvMF_1070: DvMF_1070 - hypothetical protein (RefSeq), at 1,310,532 to 1,311,197
_1070
DvMF_1071: DvMF_1071 - hypothetical protein (RefSeq), at 1,311,282 to 1,311,773
_1071
Position (kb)
1309
1310
1311 Strain fitness (log2 ratio)
-1
0
1 at 1308.644 kb on + strand, within DvMF_1067 at 1308.721 kb on + strand, within DvMF_1067 at 1308.729 kb on + strand, within DvMF_1067 at 1309.064 kb on - strand at 1309.112 kb on - strand at 1309.361 kb on + strand, within DvMF_1068 at 1309.587 kb on + strand at 1309.615 kb on + strand at 1309.741 kb on - strand, within DvMF_1069 at 1310.014 kb on + strand, within DvMF_1069 at 1310.188 kb on - strand, within DvMF_1069 at 1310.286 kb on + strand, within DvMF_1069 at 1310.549 kb on + strand at 1310.872 kb on + strand, within DvMF_1070 at 1310.882 kb on + strand, within DvMF_1070 at 1310.882 kb on + strand, within DvMF_1070 at 1310.971 kb on - strand, within DvMF_1070 at 1311.046 kb on - strand, within DvMF_1070 at 1311.319 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 7 day starvation, 30C remove 1,308,644 + DvMF_1067 0.35 -0.1 1,308,721 + DvMF_1067 0.47 -0.1 1,308,729 + DvMF_1067 0.49 -0.1 1,309,064 - +0.6 1,309,112 - +0.7 1,309,361 + DvMF_1068 0.59 +0.6 1,309,587 + +0.7 1,309,615 + +0.7 1,309,741 - DvMF_1069 0.16 +0.7 1,310,014 + DvMF_1069 0.45 +0.7 1,310,188 - DvMF_1069 0.64 +0.2 1,310,286 + DvMF_1069 0.75 +0.1 1,310,549 + +0.3 1,310,872 + DvMF_1070 0.51 +0.3 1,310,882 + DvMF_1070 0.53 +0.4 1,310,882 + DvMF_1070 0.53 +0.7 1,310,971 - DvMF_1070 0.66 +1.0 1,311,046 - DvMF_1070 0.77 +0.7 1,311,319 + +0.8
Or see this region's nucleotide sequence