Experiment: m.b. Polymyxin B sulfate 0.0004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2673 and Dshi_2674 are separated by 357 nucleotides Dshi_2674 and Dshi_2675 are separated by 54 nucleotides
Dshi_2673: Dshi_2673 - Pyrrolo-quinoline quinone (RefSeq), at 2,828,781 to 2,830,547
_2673
Dshi_2674: Dshi_2674 - two component transcriptional regulator, LuxR family (RefSeq), at 2,830,905 to 2,831,591
_2674
Dshi_2675: Dshi_2675 - domain of unknown function DUF1745 (RefSeq), at 2,831,646 to 2,832,845
_2675
Position (kb)
2830
2831
2832 Strain fitness (log2 ratio)
-1
0
1 at 2829.918 kb on + strand, within Dshi_2673 at 2830.272 kb on + strand, within Dshi_2673 at 2830.286 kb on - strand, within Dshi_2673 at 2830.294 kb on + strand, within Dshi_2673 at 2830.426 kb on + strand at 2830.494 kb on - strand at 2830.634 kb on - strand at 2830.764 kb on - strand at 2830.973 kb on + strand at 2830.981 kb on - strand, within Dshi_2674 at 2831.141 kb on + strand, within Dshi_2674 at 2831.147 kb on - strand, within Dshi_2674 at 2831.289 kb on + strand, within Dshi_2674 at 2831.297 kb on - strand, within Dshi_2674 at 2831.297 kb on - strand, within Dshi_2674 at 2831.345 kb on + strand, within Dshi_2674 at 2831.359 kb on - strand, within Dshi_2674 at 2831.373 kb on - strand, within Dshi_2674 at 2831.440 kb on + strand, within Dshi_2674 at 2831.447 kb on - strand, within Dshi_2674 at 2831.516 kb on - strand, within Dshi_2674 at 2831.585 kb on + strand at 2831.849 kb on - strand, within Dshi_2675 at 2831.956 kb on + strand, within Dshi_2675 at 2832.076 kb on + strand, within Dshi_2675 at 2832.121 kb on + strand, within Dshi_2675 at 2832.124 kb on - strand, within Dshi_2675 at 2832.132 kb on + strand, within Dshi_2675 at 2832.172 kb on - strand, within Dshi_2675 at 2832.173 kb on + strand, within Dshi_2675 at 2832.252 kb on + strand, within Dshi_2675 at 2832.304 kb on + strand, within Dshi_2675 at 2832.319 kb on + strand, within Dshi_2675 at 2832.436 kb on + strand, within Dshi_2675 at 2832.528 kb on - strand, within Dshi_2675
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Polymyxin B sulfate 0.0004 mg/ml remove 2,829,918 + Dshi_2673 0.64 -0.2 2,830,272 + Dshi_2673 0.84 +1.0 2,830,286 - Dshi_2673 0.85 -0.2 2,830,294 + Dshi_2673 0.86 +0.6 2,830,426 + +1.0 2,830,494 - -0.2 2,830,634 - -0.5 2,830,764 - -0.1 2,830,973 + -0.3 2,830,981 - Dshi_2674 0.11 +0.1 2,831,141 + Dshi_2674 0.34 +0.3 2,831,147 - Dshi_2674 0.35 +1.2 2,831,289 + Dshi_2674 0.56 +0.2 2,831,297 - Dshi_2674 0.57 -0.0 2,831,297 - Dshi_2674 0.57 +1.6 2,831,345 + Dshi_2674 0.64 -0.2 2,831,359 - Dshi_2674 0.66 +1.1 2,831,373 - Dshi_2674 0.68 +0.4 2,831,440 + Dshi_2674 0.78 +0.7 2,831,447 - Dshi_2674 0.79 +1.4 2,831,516 - Dshi_2674 0.89 +1.3 2,831,585 + -1.3 2,831,849 - Dshi_2675 0.17 +0.3 2,831,956 + Dshi_2675 0.26 -0.3 2,832,076 + Dshi_2675 0.36 +0.1 2,832,121 + Dshi_2675 0.40 +0.4 2,832,124 - Dshi_2675 0.40 +0.0 2,832,132 + Dshi_2675 0.41 -0.4 2,832,172 - Dshi_2675 0.44 -1.1 2,832,173 + Dshi_2675 0.44 -0.2 2,832,252 + Dshi_2675 0.51 -0.6 2,832,304 + Dshi_2675 0.55 -1.4 2,832,319 + Dshi_2675 0.56 -0.2 2,832,436 + Dshi_2675 0.66 -0.1 2,832,528 - Dshi_2675 0.73 -0.0
Or see this region's nucleotide sequence