Experiment: m.b. Polymyxin B sulfate 0.0004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0633 and Dshi_0634 are separated by 204 nucleotides Dshi_0634 and Dshi_0635 are separated by 2 nucleotides
Dshi_0633: Dshi_0633 - Phosphate butyryltransferase (RefSeq), at 630,977 to 632,392
_0633
Dshi_0634: Dshi_0634 - glycosyltransferase, putative (RefSeq), at 632,597 to 633,406
_0634
Dshi_0635: Dshi_0635 - cyclic nucleotide-binding (RefSeq), at 633,409 to 635,610
_0635
Position (kb) 632
633
634 Strain fitness (log2 ratio) -2
-1
0
1
2 at 631.647 kb on + strand, within Dshi_0633 at 631.653 kb on + strand, within Dshi_0633 at 631.815 kb on - strand, within Dshi_0633 at 631.876 kb on + strand, within Dshi_0633 at 631.928 kb on - strand, within Dshi_0633 at 631.986 kb on - strand, within Dshi_0633 at 632.122 kb on - strand, within Dshi_0633 at 632.157 kb on - strand, within Dshi_0633 at 632.287 kb on + strand at 632.287 kb on + strand at 632.336 kb on + strand at 632.336 kb on + strand at 632.344 kb on - strand at 632.344 kb on - strand at 632.344 kb on - strand at 632.356 kb on - strand at 632.413 kb on + strand at 632.446 kb on + strand at 632.545 kb on + strand at 632.621 kb on - strand at 632.655 kb on - strand at 632.677 kb on + strand at 632.700 kb on - strand, within Dshi_0634 at 632.756 kb on - strand, within Dshi_0634 at 632.798 kb on - strand, within Dshi_0634 at 632.921 kb on - strand, within Dshi_0634 at 632.947 kb on + strand, within Dshi_0634 at 632.996 kb on - strand, within Dshi_0634 at 633.037 kb on + strand, within Dshi_0634 at 633.202 kb on - strand, within Dshi_0634 at 633.212 kb on - strand, within Dshi_0634 at 633.403 kb on - strand at 633.408 kb on - strand at 633.519 kb on + strand at 633.586 kb on + strand at 633.589 kb on - strand at 633.591 kb on + strand at 633.591 kb on + strand at 633.616 kb on + strand at 634.123 kb on + strand at 634.131 kb on - strand, within Dshi_0635 at 634.131 kb on - strand, within Dshi_0635 at 634.188 kb on + strand, within Dshi_0635 at 634.203 kb on - strand, within Dshi_0635 at 634.344 kb on + strand, within Dshi_0635
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Polymyxin B sulfate 0.0004 mg/ml remove 631,647 + Dshi_0633 0.47 +0.2 631,653 + Dshi_0633 0.48 +0.2 631,815 - Dshi_0633 0.59 +0.4 631,876 + Dshi_0633 0.63 -2.0 631,928 - Dshi_0633 0.67 -0.3 631,986 - Dshi_0633 0.71 -0.4 632,122 - Dshi_0633 0.81 -1.0 632,157 - Dshi_0633 0.83 +0.5 632,287 + -0.2 632,287 + +0.6 632,336 + +1.3 632,336 + -0.8 632,344 - -0.6 632,344 - +0.4 632,344 - -1.6 632,356 - +0.4 632,413 + +0.2 632,446 + -0.1 632,545 + +0.9 632,621 - +0.5 632,655 - +0.2 632,677 + -0.3 632,700 - Dshi_0634 0.13 +1.8 632,756 - Dshi_0634 0.20 +1.5 632,798 - Dshi_0634 0.25 +0.5 632,921 - Dshi_0634 0.40 +1.6 632,947 + Dshi_0634 0.43 +0.0 632,996 - Dshi_0634 0.49 +0.4 633,037 + Dshi_0634 0.54 +1.1 633,202 - Dshi_0634 0.75 +0.3 633,212 - Dshi_0634 0.76 +1.3 633,403 - -0.0 633,408 - -0.6 633,519 + -0.9 633,586 + +0.1 633,589 - +0.3 633,591 + +0.3 633,591 + +0.2 633,616 + +0.7 634,123 + +1.1 634,131 - Dshi_0635 0.33 -0.8 634,131 - Dshi_0635 0.33 -0.2 634,188 + Dshi_0635 0.35 +0.3 634,203 - Dshi_0635 0.36 -0.6 634,344 + Dshi_0635 0.42 -0.5
Or see this region's nucleotide sequence