Strain Fitness in Marinobacter adhaerens HP15 around HP15_4178
Experiment: m.b. Paraquat dichloride 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Paraquat dichloride 0.002 mg/ml |
---|---|---|---|---|---|
remove | |||||
4,417,486 | + | HP15_4177 | 0.61 | +0.4 | |
4,417,586 | + | HP15_4177 | 0.66 | -0.4 | |
4,417,593 | + | HP15_4177 | 0.67 | +0.4 | |
4,417,773 | - | HP15_4177 | 0.76 | -0.2 | |
4,417,773 | - | HP15_4177 | 0.76 | -0.7 | |
4,417,893 | - | HP15_4177 | 0.82 | +0.7 | |
4,417,893 | - | HP15_4177 | 0.82 | +0.5 | |
4,417,912 | + | HP15_4177 | 0.83 | +0.1 | |
4,417,975 | + | HP15_4177 | 0.86 | -0.2 | |
4,417,975 | + | HP15_4177 | 0.86 | -1.4 | |
4,418,021 | - | HP15_4177 | 0.88 | +1.7 | |
4,418,069 | + | +0.3 | |||
4,418,098 | - | +0.1 | |||
4,418,121 | - | -0.9 | |||
4,418,157 | + | -0.5 | |||
4,418,157 | + | -0.5 | |||
4,418,165 | - | -0.2 | |||
4,418,176 | - | +0.0 | |||
4,418,450 | - | HP15_4178 | 0.19 | +0.2 | |
4,418,461 | - | HP15_4178 | 0.21 | -0.1 | |
4,418,595 | - | HP15_4178 | 0.35 | -0.9 | |
4,418,710 | + | HP15_4178 | 0.48 | +0.1 | |
4,418,813 | + | HP15_4178 | 0.59 | -0.2 | |
4,418,952 | - | HP15_4178 | 0.74 | +0.1 | |
4,419,061 | - | HP15_4178 | 0.86 | -0.6 | |
4,419,574 | + | HP15_4179 | 0.20 | -0.5 | |
4,419,591 | - | HP15_4179 | 0.20 | +0.2 | |
4,420,064 | - | HP15_4179 | 0.44 | +0.8 |
Or see this region's nucleotide sequence