Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c14850
Experiment: m.b. Benzalkonium Chloride 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Benzalkonium Chloride 0.004 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,540,795 | + | -0.0 | |||
1,540,800 | + | +0.5 | |||
1,541,166 | + | PGA1_c14850 | 0.90 | -0.7 | |
1,541,193 | + | +2.1 | |||
1,541,224 | - | -1.6 | |||
1,541,364 | + | PGA1_c14860 | 0.14 | -1.5 | |
1,541,372 | + | PGA1_c14860 | 0.14 | +0.8 | |
1,541,372 | - | PGA1_c14860 | 0.14 | +0.6 | |
1,541,423 | + | PGA1_c14860 | 0.18 | -0.3 | |
1,541,431 | - | PGA1_c14860 | 0.19 | +0.3 | |
1,541,440 | - | PGA1_c14860 | 0.20 | -0.5 | |
1,541,514 | + | PGA1_c14860 | 0.25 | -0.2 | |
1,541,551 | + | PGA1_c14860 | 0.28 | -0.4 | |
1,541,559 | + | PGA1_c14860 | 0.29 | +0.9 | |
1,541,615 | + | PGA1_c14860 | 0.33 | +0.3 | |
1,541,618 | - | PGA1_c14860 | 0.34 | -0.1 | |
1,541,623 | - | PGA1_c14860 | 0.34 | +1.1 | |
1,541,679 | - | PGA1_c14860 | 0.38 | -0.1 | |
1,541,738 | + | PGA1_c14860 | 0.43 | -1.1 | |
1,541,849 | - | PGA1_c14860 | 0.52 | -1.1 | |
1,541,860 | + | PGA1_c14860 | 0.53 | -0.4 | |
1,541,868 | - | PGA1_c14860 | 0.53 | +0.5 | |
1,541,888 | - | PGA1_c14860 | 0.55 | -0.4 | |
1,542,075 | + | PGA1_c14860 | 0.70 | -1.3 | |
1,542,076 | + | PGA1_c14860 | 0.70 | -0.2 | |
1,542,101 | - | PGA1_c14860 | 0.72 | +0.4 |
Or see this region's nucleotide sequence