Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3423 and Dsui_3424 are separated by 85 nucleotides Dsui_3424 and Dsui_3425 are separated by 82 nucleotides Dsui_3425 and Dsui_3426 are separated by 189 nucleotides
Dsui_3423: Dsui_3423 - hydroxypyruvate isomerase, at 3,674,894 to 3,675,688
_3423
Dsui_3424: Dsui_3424 - ATP:cob(I)alamin adenosyltransferase, at 3,675,774 to 3,676,352
_3424
Dsui_3425: Dsui_3425 - putative translation initiation inhibitor, yjgF family, at 3,676,435 to 3,676,833
_3425
Dsui_3426: Dsui_3426 - transcriptional regulator, at 3,677,023 to 3,677,925
_3426
Position (kb)
3675
3676
3677 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 3674.863 kb on + strand at 3674.889 kb on - strand at 3674.929 kb on - strand at 3674.929 kb on - strand at 3675.112 kb on + strand at 3675.196 kb on - strand, within Dsui_3423 at 3675.480 kb on - strand, within Dsui_3423 at 3675.563 kb on - strand, within Dsui_3423 at 3675.579 kb on - strand, within Dsui_3423 at 3675.670 kb on - strand at 3675.723 kb on + strand at 3675.742 kb on + strand at 3675.760 kb on - strand at 3675.765 kb on - strand at 3675.818 kb on + strand at 3675.852 kb on + strand, within Dsui_3424 at 3675.912 kb on + strand, within Dsui_3424 at 3676.039 kb on + strand, within Dsui_3424 at 3676.042 kb on - strand at 3676.259 kb on + strand, within Dsui_3424 at 3676.313 kb on + strand at 3676.489 kb on - strand at 3676.497 kb on + strand, within Dsui_3425 at 3676.538 kb on - strand, within Dsui_3425 at 3676.561 kb on + strand at 3676.621 kb on + strand, within Dsui_3425 at 3676.646 kb on + strand at 3676.654 kb on - strand at 3676.778 kb on + strand, within Dsui_3425 at 3676.788 kb on + strand at 3676.788 kb on - strand at 3676.796 kb on - strand at 3676.895 kb on + strand at 3676.904 kb on + strand at 3676.921 kb on - strand at 3676.930 kb on + strand at 3677.093 kb on - strand at 3677.290 kb on - strand, within Dsui_3426
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 3,674,863 + +0.6 3,674,889 - -1.5 3,674,929 - +0.6 3,674,929 - +0.6 3,675,112 + +0.6 3,675,196 - Dsui_3423 0.38 +1.6 3,675,480 - Dsui_3423 0.74 -1.3 3,675,563 - Dsui_3423 0.84 -1.0 3,675,579 - Dsui_3423 0.86 -0.4 3,675,670 - +0.6 3,675,723 + -2.2 3,675,742 + -1.1 3,675,760 - -0.4 3,675,765 - +0.6 3,675,818 + -3.9 3,675,852 + Dsui_3424 0.13 -1.0 3,675,912 + Dsui_3424 0.24 -2.1 3,676,039 + Dsui_3424 0.46 -1.8 3,676,042 - -0.4 3,676,259 + Dsui_3424 0.84 -2.1 3,676,313 + -1.2 3,676,489 - -0.4 3,676,497 + Dsui_3425 0.16 -0.4 3,676,538 - Dsui_3425 0.26 -1.0 3,676,561 + +0.6 3,676,621 + Dsui_3425 0.47 -0.4 3,676,646 + -0.4 3,676,654 - +0.6 3,676,778 + Dsui_3425 0.86 -2.0 3,676,788 + -0.4 3,676,788 - +0.6 3,676,796 - +0.6 3,676,895 + +0.6 3,676,904 + +0.6 3,676,921 - -1.0 3,676,930 + -1.0 3,677,093 - -0.4 3,677,290 - Dsui_3426 0.30 -1.4
Or see this region's nucleotide sequence