Strain Fitness in Dechlorosoma suillum PS around Dsui_3190

Experiment: propionate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_3189 and Dsui_3190 are separated by 213 nucleotidesDsui_3190 and Dsui_3191 are separated by 169 nucleotidesDsui_3191 and Dsui_3192 are separated by 11 nucleotides Dsui_3189: Dsui_3189 - folylpolyglutamate synthase/dihydrofolate synthase, at 3,422,860 to 3,424,176 _3189 Dsui_3190: Dsui_3190 - acetyl-CoA carboxylase, carboxyl transferase, beta subunit, at 3,424,390 to 3,425,256 _3190 Dsui_3191: Dsui_3191 - tryptophan synthase, alpha subunit, at 3,425,426 to 3,426,229 _3191 Dsui_3192: Dsui_3192 - tryptophan synthase, beta subunit, at 3,426,241 to 3,427,437 _3192 Position (kb) 3424 3425 3426Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 3424.356 kb on + strandat 3425.352 kb on - strandat 3425.392 kb on - strandat 3425.392 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction propionate (C)
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3,424,356 + -1.1
3,425,352 - -3.8
3,425,392 - -0.3
3,425,392 - -1.8

Or see this region's nucleotide sequence