Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2965 and Dsui_2966 overlap by 4 nucleotides Dsui_2966 and Dsui_2967 are separated by 41 nucleotides Dsui_2967 and Dsui_2968 overlap by 4 nucleotides Dsui_2968 and Dsui_2969 overlap by 4 nucleotides
Dsui_2965: Dsui_2965 - cobalamin biosynthesis protein CbiG, at 3,173,041 to 3,173,826
_2965
Dsui_2966: Dsui_2966 - cobalamin biosynthesis protein CbiG, at 3,173,823 to 3,174,230
_2966
Dsui_2967: Dsui_2967 - precorrin-3B C17-methyltransferase, at 3,174,272 to 3,175,267
_2967
Dsui_2968: Dsui_2968 - ferredoxin, at 3,175,264 to 3,175,602
_2968
Dsui_2969: Dsui_2969 - uroporphyrin-III C-methyltransferase, at 3,175,599 to 3,176,366
_2969
Position (kb)
3174
3175
3176 Strain fitness (log2 ratio)
-2
-1
0
1 at 3173.501 kb on + strand, within Dsui_2965 at 3173.693 kb on - strand at 3173.707 kb on + strand, within Dsui_2965 at 3173.710 kb on - strand, within Dsui_2965 at 3173.829 kb on - strand at 3173.940 kb on - strand at 3173.965 kb on + strand, within Dsui_2966 at 3173.965 kb on + strand, within Dsui_2966 at 3174.018 kb on + strand, within Dsui_2966 at 3174.021 kb on - strand at 3174.057 kb on + strand, within Dsui_2966 at 3174.299 kb on + strand at 3174.306 kb on - strand at 3174.476 kb on + strand, within Dsui_2967 at 3174.505 kb on - strand, within Dsui_2967 at 3174.505 kb on - strand, within Dsui_2967 at 3174.694 kb on - strand at 3174.777 kb on - strand at 3174.791 kb on + strand, within Dsui_2967 at 3174.796 kb on + strand, within Dsui_2967 at 3174.802 kb on + strand, within Dsui_2967 at 3174.805 kb on - strand at 3174.967 kb on + strand, within Dsui_2967 at 3175.014 kb on + strand, within Dsui_2967 at 3175.022 kb on - strand, within Dsui_2967 at 3175.028 kb on + strand, within Dsui_2967 at 3175.028 kb on + strand, within Dsui_2967 at 3175.036 kb on - strand, within Dsui_2967 at 3175.065 kb on - strand, within Dsui_2967 at 3175.115 kb on + strand, within Dsui_2967 at 3175.137 kb on - strand, within Dsui_2967 at 3175.243 kb on + strand at 3175.327 kb on - strand, within Dsui_2968 at 3175.336 kb on + strand, within Dsui_2968 at 3175.350 kb on + strand, within Dsui_2968 at 3175.360 kb on - strand at 3175.383 kb on + strand, within Dsui_2968 at 3175.391 kb on - strand, within Dsui_2968 at 3175.427 kb on - strand, within Dsui_2968 at 3175.520 kb on + strand, within Dsui_2968 at 3175.522 kb on - strand, within Dsui_2968 at 3175.597 kb on - strand at 3175.690 kb on + strand at 3175.713 kb on + strand, within Dsui_2969 at 3175.828 kb on + strand, within Dsui_2969 at 3175.975 kb on + strand, within Dsui_2969 at 3176.067 kb on + strand, within Dsui_2969 at 3176.102 kb on - strand, within Dsui_2969 at 3176.173 kb on + strand, within Dsui_2969 at 3176.253 kb on - strand, within Dsui_2969
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 3,173,501 + Dsui_2965 0.59 -0.4 3,173,693 - +0.6 3,173,707 + Dsui_2965 0.85 -0.4 3,173,710 - Dsui_2965 0.85 -0.4 3,173,829 - -0.9 3,173,940 - -0.9 3,173,965 + Dsui_2966 0.35 +0.4 3,173,965 + Dsui_2966 0.35 -0.9 3,174,018 + Dsui_2966 0.48 +0.6 3,174,021 - -0.9 3,174,057 + Dsui_2966 0.57 +1.6 3,174,299 + -0.4 3,174,306 - -0.4 3,174,476 + Dsui_2967 0.20 -1.9 3,174,505 - Dsui_2967 0.23 -0.9 3,174,505 - Dsui_2967 0.23 -1.4 3,174,694 - +0.6 3,174,777 - +0.6 3,174,791 + Dsui_2967 0.52 -1.4 3,174,796 + Dsui_2967 0.53 -1.9 3,174,802 + Dsui_2967 0.53 +0.6 3,174,805 - -0.4 3,174,967 + Dsui_2967 0.70 +0.6 3,175,014 + Dsui_2967 0.74 -0.4 3,175,022 - Dsui_2967 0.75 -2.4 3,175,028 + Dsui_2967 0.76 -0.9 3,175,028 + Dsui_2967 0.76 -0.4 3,175,036 - Dsui_2967 0.77 -0.9 3,175,065 - Dsui_2967 0.80 -2.5 3,175,115 + Dsui_2967 0.85 +0.6 3,175,137 - Dsui_2967 0.87 -1.4 3,175,243 + -0.4 3,175,327 - Dsui_2968 0.19 -1.4 3,175,336 + Dsui_2968 0.21 -1.7 3,175,350 + Dsui_2968 0.25 -1.2 3,175,360 - +0.6 3,175,383 + Dsui_2968 0.35 +1.6 3,175,391 - Dsui_2968 0.37 +0.6 3,175,427 - Dsui_2968 0.48 -0.4 3,175,520 + Dsui_2968 0.76 +0.6 3,175,522 - Dsui_2968 0.76 -0.9 3,175,597 - -0.4 3,175,690 + +0.6 3,175,713 + Dsui_2969 0.15 -1.4 3,175,828 + Dsui_2969 0.30 -1.7 3,175,975 + Dsui_2969 0.49 +1.2 3,176,067 + Dsui_2969 0.61 -1.4 3,176,102 - Dsui_2969 0.65 -1.7 3,176,173 + Dsui_2969 0.75 -1.4 3,176,253 - Dsui_2969 0.85 +0.6
Or see this region's nucleotide sequence