Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2910 and Dsui_2911 are separated by 5 nucleotides Dsui_2911 and Dsui_2912 are separated by 277 nucleotides Dsui_2912 and Dsui_2913 are separated by 92 nucleotides Dsui_2913 and Dsui_2914 are separated by 29 nucleotides
Dsui_2910: Dsui_2910 - hypothetical protein, at 3,113,922 to 3,114,293
_2910
Dsui_2911: Dsui_2911 - cation/cationic drug transporter, at 3,114,299 to 3,114,673
_2911
Dsui_2912: Dsui_2912 - putative xylanase/chitin deacetylase, at 3,114,951 to 3,115,859
_2912
Dsui_2913: Dsui_2913 - dihydroxynaphthoate synthase, at 3,115,952 to 3,116,782
_2913
Dsui_2914: Dsui_2914 - cytochrome b, at 3,116,812 to 3,117,429
_2914
Position (kb)
3114
3115
3116 Strain fitness (log2 ratio)
-2
-1
0
1 at 3114.295 kb on - strand at 3114.441 kb on + strand, within Dsui_2911 at 3114.458 kb on - strand, within Dsui_2911 at 3114.488 kb on - strand at 3114.639 kb on + strand at 3114.645 kb on + strand at 3114.718 kb on + strand at 3114.725 kb on + strand at 3114.726 kb on - strand at 3114.738 kb on + strand at 3114.748 kb on - strand at 3114.748 kb on - strand at 3114.816 kb on - strand at 3114.872 kb on + strand at 3114.885 kb on + strand at 3114.893 kb on - strand at 3114.893 kb on - strand at 3114.898 kb on - strand at 3114.898 kb on - strand at 3114.961 kb on - strand at 3115.066 kb on + strand, within Dsui_2912 at 3115.140 kb on + strand, within Dsui_2912 at 3115.164 kb on + strand, within Dsui_2912 at 3115.169 kb on + strand, within Dsui_2912 at 3115.177 kb on - strand at 3115.177 kb on - strand, within Dsui_2912 at 3115.177 kb on - strand, within Dsui_2912 at 3115.298 kb on + strand, within Dsui_2912 at 3115.302 kb on - strand at 3115.451 kb on - strand, within Dsui_2912 at 3115.498 kb on + strand, within Dsui_2912 at 3115.666 kb on + strand, within Dsui_2912 at 3115.803 kb on + strand at 3115.959 kb on + strand at 3115.977 kb on - strand at 3116.040 kb on - strand, within Dsui_2913 at 3116.184 kb on + strand, within Dsui_2913 at 3116.278 kb on + strand, within Dsui_2913 at 3116.335 kb on + strand, within Dsui_2913 at 3116.399 kb on - strand at 3116.509 kb on - strand at 3116.512 kb on + strand, within Dsui_2913 at 3116.682 kb on + strand, within Dsui_2913 at 3116.832 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 3,114,295 - -0.4 3,114,441 + Dsui_2911 0.38 +0.5 3,114,458 - Dsui_2911 0.42 -2.2 3,114,488 - -0.4 3,114,639 + -0.1 3,114,645 + +0.2 3,114,718 + -0.0 3,114,725 + +0.2 3,114,726 - -0.4 3,114,738 + -2.0 3,114,748 - +0.6 3,114,748 - -0.4 3,114,816 - -1.0 3,114,872 + +0.1 3,114,885 + +0.2 3,114,893 - +0.6 3,114,893 - +0.6 3,114,898 - -2.2 3,114,898 - +0.6 3,114,961 - +0.6 3,115,066 + Dsui_2912 0.13 +1.4 3,115,140 + Dsui_2912 0.21 -0.9 3,115,164 + Dsui_2912 0.23 -0.6 3,115,169 + Dsui_2912 0.24 -0.5 3,115,177 - +0.6 3,115,177 - Dsui_2912 0.25 -1.0 3,115,177 - Dsui_2912 0.25 -0.4 3,115,298 + Dsui_2912 0.38 -1.4 3,115,302 - +0.6 3,115,451 - Dsui_2912 0.55 -0.4 3,115,498 + Dsui_2912 0.60 -0.4 3,115,666 + Dsui_2912 0.79 -1.1 3,115,803 + -0.2 3,115,959 + +0.0 3,115,977 - +0.6 3,116,040 - Dsui_2913 0.11 -0.4 3,116,184 + Dsui_2913 0.28 -1.4 3,116,278 + Dsui_2913 0.39 -1.0 3,116,335 + Dsui_2913 0.46 -1.0 3,116,399 - +0.6 3,116,509 - +0.6 3,116,512 + Dsui_2913 0.67 -0.0 3,116,682 + Dsui_2913 0.88 -1.1 3,116,832 + +0.6
Or see this region's nucleotide sequence