Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2882 and Dsui_2883 overlap by 1 nucleotides Dsui_2883 and Dsui_2884 are separated by 166 nucleotides Dsui_2884 and Dsui_2885 are separated by 189 nucleotides
Dsui_2882: Dsui_2882 - putative hydrolase or acyltransferase of alpha/beta superfamily, at 3,078,263 to 3,079,015
_2882
Dsui_2883: Dsui_2883 - biotin biosynthesis protein BioC, at 3,079,015 to 3,079,788
_2883
Dsui_2884: Dsui_2884 - dethiobiotin synthase, at 3,079,955 to 3,080,608
_2884
Dsui_2885: Dsui_2885 - PAS domain S-box, at 3,080,798 to 3,083,941
_2885
Position (kb)
3079
3080
3081 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 3078.983 kb on + strand at 3079.040 kb on + strand at 3079.069 kb on - strand at 3079.100 kb on - strand, within Dsui_2883 at 3079.224 kb on + strand at 3079.341 kb on + strand, within Dsui_2883 at 3079.354 kb on - strand at 3079.375 kb on - strand, within Dsui_2883 at 3079.439 kb on + strand, within Dsui_2883 at 3079.548 kb on - strand at 3079.601 kb on + strand, within Dsui_2883 at 3079.754 kb on - strand at 3079.770 kb on + strand at 3079.778 kb on - strand at 3079.928 kb on - strand at 3079.953 kb on + strand at 3079.961 kb on - strand at 3079.963 kb on + strand at 3080.005 kb on - strand at 3080.046 kb on - strand, within Dsui_2884 at 3080.148 kb on + strand, within Dsui_2884 at 3080.155 kb on - strand, within Dsui_2884 at 3080.163 kb on + strand, within Dsui_2884 at 3080.355 kb on - strand at 3080.416 kb on + strand, within Dsui_2884 at 3080.602 kb on + strand at 3080.872 kb on + strand at 3080.938 kb on + strand at 3081.282 kb on - strand, within Dsui_2885 at 3081.310 kb on + strand, within Dsui_2885 at 3081.389 kb on + strand at 3081.421 kb on + strand at 3081.497 kb on + strand, within Dsui_2885
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 3,078,983 + -4.0 3,079,040 + -5.2 3,079,069 - -0.9 3,079,100 - Dsui_2883 0.11 +0.6 3,079,224 + -1.4 3,079,341 + Dsui_2883 0.42 -4.9 3,079,354 - -0.4 3,079,375 - Dsui_2883 0.47 +0.6 3,079,439 + Dsui_2883 0.55 -4.1 3,079,548 - +0.6 3,079,601 + Dsui_2883 0.76 -3.9 3,079,754 - -0.9 3,079,770 + -1.5 3,079,778 - +0.6 3,079,928 - +0.6 3,079,953 + -3.1 3,079,961 - +0.6 3,079,963 + -3.4 3,080,005 - +0.6 3,080,046 - Dsui_2884 0.14 -1.4 3,080,148 + Dsui_2884 0.30 -5.3 3,080,155 - Dsui_2884 0.31 -0.9 3,080,163 + Dsui_2884 0.32 -3.9 3,080,355 - -0.9 3,080,416 + Dsui_2884 0.70 -4.0 3,080,602 + -0.2 3,080,872 + -0.4 3,080,938 + +0.6 3,081,282 - Dsui_2885 0.15 -0.4 3,081,310 + Dsui_2885 0.16 +0.6 3,081,389 + +0.6 3,081,421 + +0.6 3,081,497 + Dsui_2885 0.22 -0.4
Or see this region's nucleotide sequence