Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2870 and Dsui_2871 are separated by 69 nucleotides Dsui_2871 and Dsui_2872 are separated by 176 nucleotides Dsui_2872 and Dsui_2873 are separated by 10 nucleotides
Dsui_2870: Dsui_2870 - putative permease, at 3,064,913 to 3,065,839
_2870
Dsui_2871: Dsui_2871 - FHA domain-containing protein, at 3,065,909 to 3,066,799
_2871
Dsui_2872: Dsui_2872 - FKBP-type peptidyl-prolyl cis-trans isomerase, at 3,066,976 to 3,067,464
_2872
Dsui_2873: Dsui_2873 - Peroxiredoxin, at 3,067,475 to 3,067,939
_2873
Position (kb)
3065
3066
3067 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 3065.006 kb on + strand, within Dsui_2870 at 3065.133 kb on + strand, within Dsui_2870 at 3065.154 kb on + strand, within Dsui_2870 at 3065.267 kb on + strand, within Dsui_2870 at 3065.326 kb on + strand, within Dsui_2870 at 3065.467 kb on + strand, within Dsui_2870 at 3065.482 kb on + strand, within Dsui_2870 at 3065.594 kb on + strand, within Dsui_2870 at 3065.757 kb on + strand at 3065.805 kb on + strand at 3065.847 kb on - strand at 3065.967 kb on - strand at 3065.975 kb on - strand at 3066.197 kb on + strand at 3066.624 kb on - strand, within Dsui_2871 at 3066.626 kb on + strand at 3066.665 kb on + strand, within Dsui_2871 at 3066.776 kb on + strand at 3066.833 kb on - strand at 3066.833 kb on - strand at 3066.865 kb on + strand at 3066.890 kb on + strand at 3067.064 kb on - strand, within Dsui_2872 at 3067.066 kb on - strand, within Dsui_2872 at 3067.092 kb on - strand, within Dsui_2872 at 3067.097 kb on - strand, within Dsui_2872 at 3067.243 kb on - strand, within Dsui_2872 at 3067.310 kb on + strand, within Dsui_2872 at 3067.318 kb on - strand, within Dsui_2872 at 3067.433 kb on + strand at 3067.583 kb on - strand, within Dsui_2873
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 3,065,006 + Dsui_2870 0.10 -3.4 3,065,133 + Dsui_2870 0.24 -4.1 3,065,154 + Dsui_2870 0.26 -2.8 3,065,267 + Dsui_2870 0.38 -1.7 3,065,326 + Dsui_2870 0.45 -1.9 3,065,467 + Dsui_2870 0.60 +0.7 3,065,482 + Dsui_2870 0.61 -1.3 3,065,594 + Dsui_2870 0.73 -2.3 3,065,757 + -4.0 3,065,805 + -3.3 3,065,847 - -0.3 3,065,967 - +0.1 3,065,975 - +0.7 3,066,197 + +0.7 3,066,624 - Dsui_2871 0.80 -0.3 3,066,626 + -1.3 3,066,665 + Dsui_2871 0.85 +0.7 3,066,776 + -0.3 3,066,833 - -0.6 3,066,833 - -0.1 3,066,865 + -1.3 3,066,890 + +0.7 3,067,064 - Dsui_2872 0.18 +0.0 3,067,066 - Dsui_2872 0.18 +0.0 3,067,092 - Dsui_2872 0.24 +0.1 3,067,097 - Dsui_2872 0.25 +0.3 3,067,243 - Dsui_2872 0.55 +0.3 3,067,310 + Dsui_2872 0.68 -0.3 3,067,318 - Dsui_2872 0.70 +0.1 3,067,433 + -1.3 3,067,583 - Dsui_2873 0.23 -0.1
Or see this region's nucleotide sequence