Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2869 and Dsui_2870 are separated by 99 nucleotides Dsui_2870 and Dsui_2871 are separated by 69 nucleotides
Dsui_2869: Dsui_2869 - transcriptional regulator, at 3,063,842 to 3,064,813
_2869
Dsui_2870: Dsui_2870 - putative permease, at 3,064,913 to 3,065,839
_2870
Dsui_2871: Dsui_2871 - FHA domain-containing protein, at 3,065,909 to 3,066,799
_2871
Position (kb)
3064
3065
3066 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 3063.946 kb on - strand, within Dsui_2869 at 3063.947 kb on - strand, within Dsui_2869 at 3064.002 kb on + strand, within Dsui_2869 at 3064.194 kb on - strand, within Dsui_2869 at 3064.356 kb on + strand, within Dsui_2869 at 3064.465 kb on + strand, within Dsui_2869 at 3064.545 kb on - strand, within Dsui_2869 at 3064.632 kb on - strand, within Dsui_2869 at 3064.633 kb on + strand at 3064.881 kb on - strand at 3065.006 kb on + strand, within Dsui_2870 at 3065.133 kb on + strand, within Dsui_2870 at 3065.154 kb on + strand, within Dsui_2870 at 3065.267 kb on + strand, within Dsui_2870 at 3065.326 kb on + strand, within Dsui_2870 at 3065.467 kb on + strand, within Dsui_2870 at 3065.482 kb on + strand, within Dsui_2870 at 3065.594 kb on + strand, within Dsui_2870 at 3065.757 kb on + strand at 3065.805 kb on + strand at 3065.847 kb on - strand at 3065.967 kb on - strand at 3065.975 kb on - strand at 3066.197 kb on + strand at 3066.624 kb on - strand, within Dsui_2871 at 3066.626 kb on + strand at 3066.665 kb on + strand, within Dsui_2871 at 3066.776 kb on + strand at 3066.833 kb on - strand at 3066.833 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 3,063,946 - Dsui_2869 0.11 -1.7 3,063,947 - Dsui_2869 0.11 -1.6 3,064,002 + Dsui_2869 0.16 -0.9 3,064,194 - Dsui_2869 0.36 -1.9 3,064,356 + Dsui_2869 0.53 -0.9 3,064,465 + Dsui_2869 0.64 -0.9 3,064,545 - Dsui_2869 0.72 -2.0 3,064,632 - Dsui_2869 0.81 -2.3 3,064,633 + +0.7 3,064,881 - +0.7 3,065,006 + Dsui_2870 0.10 -3.4 3,065,133 + Dsui_2870 0.24 -4.1 3,065,154 + Dsui_2870 0.26 -2.8 3,065,267 + Dsui_2870 0.38 -1.7 3,065,326 + Dsui_2870 0.45 -1.9 3,065,467 + Dsui_2870 0.60 +0.7 3,065,482 + Dsui_2870 0.61 -1.3 3,065,594 + Dsui_2870 0.73 -2.3 3,065,757 + -4.0 3,065,805 + -3.3 3,065,847 - -0.3 3,065,967 - +0.1 3,065,975 - +0.7 3,066,197 + +0.7 3,066,624 - Dsui_2871 0.80 -0.3 3,066,626 + -1.3 3,066,665 + Dsui_2871 0.85 +0.7 3,066,776 + -0.3 3,066,833 - -0.6 3,066,833 - -0.1
Or see this region's nucleotide sequence