Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2770 and Dsui_2771 are separated by 103 nucleotides Dsui_2771 and Dsui_2772 are separated by 209 nucleotides Dsui_2772 and Dsui_2773 are separated by 338 nucleotides
Dsui_2770: Dsui_2770 - penicillin-binding protein 1C, at 2,932,961 to 2,935,231
_2770
Dsui_2771: Dsui_2771 - hypothetical protein, at 2,935,335 to 2,935,880
_2771
Dsui_2772: Dsui_2772 - uncharacterized protein, possibly involved in aromatic compounds catabolism, at 2,936,090 to 2,936,551
_2772
Dsui_2773: Dsui_2773 - putative enzyme involved in biosynthesis of extracellular polysaccharides, at 2,936,890 to 2,937,207
_2773
Position (kb)
2936
2937 Strain fitness (log2 ratio)
-2
-1
0
1 at 2935.199 kb on - strand at 2935.397 kb on + strand at 2935.397 kb on + strand at 2935.405 kb on - strand, within Dsui_2771 at 2935.405 kb on - strand, within Dsui_2771 at 2935.425 kb on - strand, within Dsui_2771 at 2935.467 kb on - strand, within Dsui_2771 at 2935.472 kb on - strand, within Dsui_2771 at 2935.472 kb on - strand, within Dsui_2771 at 2935.485 kb on - strand, within Dsui_2771 at 2935.522 kb on - strand, within Dsui_2771 at 2935.534 kb on - strand, within Dsui_2771 at 2935.564 kb on + strand at 2935.572 kb on - strand, within Dsui_2771 at 2935.572 kb on - strand, within Dsui_2771 at 2935.701 kb on + strand at 2935.855 kb on - strand at 2936.106 kb on - strand at 2936.230 kb on - strand, within Dsui_2772 at 2936.241 kb on - strand, within Dsui_2772 at 2936.440 kb on - strand, within Dsui_2772 at 2936.501 kb on - strand, within Dsui_2772 at 2936.662 kb on - strand at 2937.104 kb on - strand at 2937.108 kb on + strand, within Dsui_2773 at 2937.120 kb on + strand, within Dsui_2773 at 2937.135 kb on - strand, within Dsui_2773 at 2937.346 kb on + strand at 2937.441 kb on + strand at 2937.468 kb on + strand at 2937.528 kb on - strand at 2937.548 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 2,935,199 - -1.4 2,935,397 + -0.4 2,935,397 + -0.4 2,935,405 - Dsui_2771 0.13 +0.1 2,935,405 - Dsui_2771 0.13 -0.4 2,935,425 - Dsui_2771 0.16 +0.4 2,935,467 - Dsui_2771 0.24 -0.1 2,935,472 - Dsui_2771 0.25 +0.0 2,935,472 - Dsui_2771 0.25 +0.0 2,935,485 - Dsui_2771 0.27 +0.0 2,935,522 - Dsui_2771 0.34 +0.1 2,935,534 - Dsui_2771 0.36 +0.3 2,935,564 + +0.6 2,935,572 - Dsui_2771 0.43 +0.9 2,935,572 - Dsui_2771 0.43 +0.0 2,935,701 + +0.6 2,935,855 - -0.3 2,936,106 - -1.0 2,936,230 - Dsui_2772 0.30 -2.4 2,936,241 - Dsui_2772 0.33 -0.4 2,936,440 - Dsui_2772 0.76 -1.4 2,936,501 - Dsui_2772 0.89 -1.2 2,936,662 - -0.4 2,937,104 - -0.4 2,937,108 + Dsui_2773 0.69 +0.1 2,937,120 + Dsui_2773 0.72 +0.0 2,937,135 - Dsui_2773 0.77 -1.7 2,937,346 + +0.4 2,937,441 + +0.3 2,937,468 + -0.3 2,937,528 - -1.4 2,937,548 - -1.0
Or see this region's nucleotide sequence