Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2384 and Dsui_2385 are separated by 49 nucleotides Dsui_2385 and Dsui_2386 are separated by 111 nucleotides
Dsui_2384: Dsui_2384 - putative esterase of the alpha-beta hydrolase superfamily, at 2,534,074 to 2,535,162
_2384
Dsui_2385: Dsui_2385 - transcription-repair coupling factor Mfd, at 2,535,212 to 2,538,808
_2385
Dsui_2386: Dsui_2386 - pyruvate-formate lyase-activating enzyme, at 2,538,920 to 2,540,020
_2386
Position (kb)
2535
2536
2537
2538
2539 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2534.226 kb on + strand, within Dsui_2384 at 2534.234 kb on - strand, within Dsui_2384 at 2534.234 kb on - strand, within Dsui_2384 at 2534.386 kb on - strand, within Dsui_2384 at 2534.464 kb on + strand, within Dsui_2384 at 2534.472 kb on - strand, within Dsui_2384 at 2534.575 kb on - strand, within Dsui_2384 at 2534.580 kb on - strand, within Dsui_2384 at 2534.597 kb on + strand, within Dsui_2384 at 2534.610 kb on + strand at 2534.768 kb on - strand, within Dsui_2384 at 2534.802 kb on - strand, within Dsui_2384 at 2534.885 kb on - strand, within Dsui_2384 at 2534.933 kb on + strand, within Dsui_2384 at 2534.970 kb on + strand at 2534.978 kb on - strand, within Dsui_2384 at 2535.017 kb on + strand, within Dsui_2384 at 2535.092 kb on - strand at 2535.145 kb on - strand at 2535.152 kb on + strand at 2535.155 kb on - strand at 2535.160 kb on - strand at 2535.200 kb on + strand at 2535.200 kb on + strand at 2535.208 kb on - strand at 2535.372 kb on + strand at 2535.479 kb on + strand at 2535.503 kb on + strand at 2535.530 kb on - strand at 2535.577 kb on - strand, within Dsui_2385 at 2535.586 kb on + strand at 2535.690 kb on - strand, within Dsui_2385 at 2535.811 kb on + strand at 2535.998 kb on + strand, within Dsui_2385 at 2536.122 kb on - strand, within Dsui_2385 at 2536.134 kb on - strand, within Dsui_2385 at 2536.210 kb on - strand, within Dsui_2385 at 2536.222 kb on + strand, within Dsui_2385 at 2536.479 kb on - strand, within Dsui_2385 at 2536.485 kb on + strand at 2536.906 kb on - strand, within Dsui_2385 at 2536.982 kb on - strand, within Dsui_2385 at 2537.010 kb on + strand at 2537.013 kb on - strand, within Dsui_2385 at 2537.106 kb on - strand, within Dsui_2385 at 2537.217 kb on - strand, within Dsui_2385 at 2537.363 kb on + strand at 2537.493 kb on - strand, within Dsui_2385 at 2537.627 kb on - strand, within Dsui_2385 at 2537.639 kb on - strand, within Dsui_2385 at 2538.098 kb on - strand, within Dsui_2385 at 2538.103 kb on - strand, within Dsui_2385 at 2538.121 kb on + strand at 2538.128 kb on - strand, within Dsui_2385 at 2538.370 kb on - strand, within Dsui_2385 at 2538.556 kb on - strand at 2538.648 kb on + strand at 2539.039 kb on + strand at 2539.047 kb on - strand, within Dsui_2386 at 2539.047 kb on - strand, within Dsui_2386 at 2539.047 kb on - strand at 2539.048 kb on + strand at 2539.098 kb on - strand, within Dsui_2386 at 2539.320 kb on - strand at 2539.331 kb on - strand at 2539.403 kb on - strand at 2539.451 kb on - strand at 2539.451 kb on - strand at 2539.625 kb on - strand, within Dsui_2386 at 2539.632 kb on - strand, within Dsui_2386 at 2539.632 kb on - strand, within Dsui_2386 at 2539.770 kb on - strand, within Dsui_2386 at 2539.786 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 2,534,226 + Dsui_2384 0.14 -1.0 2,534,234 - Dsui_2384 0.15 -1.0 2,534,234 - Dsui_2384 0.15 -1.0 2,534,386 - Dsui_2384 0.29 -1.0 2,534,464 + Dsui_2384 0.36 -1.0 2,534,472 - Dsui_2384 0.37 +0.6 2,534,575 - Dsui_2384 0.46 -3.1 2,534,580 - Dsui_2384 0.46 +0.6 2,534,597 + Dsui_2384 0.48 -1.0 2,534,610 + -0.4 2,534,768 - Dsui_2384 0.64 -2.0 2,534,802 - Dsui_2384 0.67 -0.4 2,534,885 - Dsui_2384 0.74 -1.4 2,534,933 + Dsui_2384 0.79 -1.0 2,534,970 + +0.6 2,534,978 - Dsui_2384 0.83 -1.0 2,535,017 + Dsui_2384 0.87 -1.4 2,535,092 - -0.4 2,535,145 - -0.6 2,535,152 + +0.6 2,535,155 - +0.3 2,535,160 - -0.3 2,535,200 + +0.6 2,535,200 + -0.4 2,535,208 - -0.9 2,535,372 + +0.6 2,535,479 + +0.6 2,535,503 + +0.6 2,535,530 - -1.0 2,535,577 - Dsui_2385 0.10 -2.0 2,535,586 + +0.6 2,535,690 - Dsui_2385 0.13 -0.7 2,535,811 + -1.0 2,535,998 + Dsui_2385 0.22 -0.4 2,536,122 - Dsui_2385 0.25 -1.0 2,536,134 - Dsui_2385 0.26 -1.4 2,536,210 - Dsui_2385 0.28 -0.7 2,536,222 + Dsui_2385 0.28 -0.4 2,536,479 - Dsui_2385 0.35 -2.5 2,536,485 + +0.6 2,536,906 - Dsui_2385 0.47 -0.2 2,536,982 - Dsui_2385 0.49 -1.2 2,537,010 + +0.6 2,537,013 - Dsui_2385 0.50 -0.4 2,537,106 - Dsui_2385 0.53 -0.5 2,537,217 - Dsui_2385 0.56 -0.3 2,537,363 + +0.6 2,537,493 - Dsui_2385 0.63 -2.1 2,537,627 - Dsui_2385 0.67 -0.3 2,537,639 - Dsui_2385 0.67 -0.5 2,538,098 - Dsui_2385 0.80 +0.5 2,538,103 - Dsui_2385 0.80 +0.2 2,538,121 + +0.6 2,538,128 - Dsui_2385 0.81 -0.4 2,538,370 - Dsui_2385 0.88 -0.1 2,538,556 - -0.3 2,538,648 + -1.4 2,539,039 + -1.0 2,539,047 - Dsui_2386 0.12 -0.4 2,539,047 - Dsui_2386 0.12 -1.0 2,539,047 - +0.6 2,539,048 + -1.0 2,539,098 - Dsui_2386 0.16 -1.4 2,539,320 - +0.6 2,539,331 - -1.0 2,539,403 - +0.6 2,539,451 - +0.6 2,539,451 - +0.6 2,539,625 - Dsui_2386 0.64 +0.6 2,539,632 - Dsui_2386 0.65 -0.4 2,539,632 - Dsui_2386 0.65 -1.0 2,539,770 - Dsui_2386 0.77 -2.0 2,539,786 + +0.6
Or see this region's nucleotide sequence