Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2322 and Dsui_2323 are separated by 3 nucleotides Dsui_2323 and Dsui_2324 are separated by 54 nucleotides Dsui_2324 and Dsui_2325 are separated by 70 nucleotides Dsui_2325 and Dsui_2326 are separated by 151 nucleotides Dsui_2326 and Dsui_2327 are separated by 90 nucleotides
Dsui_2322: Dsui_2322 - hypothetical protein, at 2,478,192 to 2,478,968
_2322
Dsui_2323: Dsui_2323 - protein of unknown function (DUF1857), at 2,478,972 to 2,479,445
_2323
Dsui_2324: Dsui_2324 - hypothetical protein, at 2,479,500 to 2,479,868
_2324
Dsui_2325: Dsui_2325 - hypothetical protein, at 2,479,939 to 2,480,343
_2325
Dsui_2326: Dsui_2326 - hypothetical protein, at 2,480,495 to 2,480,734
_2326
Dsui_2327: Dsui_2327 - putative toxin-antitoxin system toxin component, PIN family, at 2,480,825 to 2,481,295
_2327
Position (kb)
2479
2480
2481 Strain fitness (log2 ratio)
-2
-1
0
1 at 2478.956 kb on + strand at 2478.970 kb on - strand at 2479.043 kb on + strand, within Dsui_2323 at 2479.096 kb on + strand, within Dsui_2323 at 2479.108 kb on - strand at 2479.170 kb on + strand, within Dsui_2323 at 2479.228 kb on + strand, within Dsui_2323 at 2479.354 kb on + strand, within Dsui_2323 at 2479.374 kb on + strand, within Dsui_2323 at 2479.399 kb on + strand at 2479.407 kb on - strand at 2479.435 kb on + strand at 2479.570 kb on - strand, within Dsui_2324 at 2479.600 kb on + strand, within Dsui_2324 at 2479.673 kb on + strand, within Dsui_2324 at 2479.712 kb on + strand, within Dsui_2324 at 2479.753 kb on + strand, within Dsui_2324 at 2479.795 kb on - strand, within Dsui_2324 at 2479.837 kb on + strand at 2479.884 kb on - strand at 2480.024 kb on + strand at 2480.202 kb on - strand, within Dsui_2325 at 2480.207 kb on - strand, within Dsui_2325 at 2480.238 kb on - strand, within Dsui_2325 at 2480.257 kb on - strand, within Dsui_2325 at 2480.288 kb on + strand at 2480.296 kb on - strand, within Dsui_2325 at 2480.419 kb on - strand at 2480.706 kb on - strand, within Dsui_2326 at 2480.745 kb on - strand at 2481.077 kb on - strand, within Dsui_2327 at 2481.197 kb on + strand at 2481.230 kb on + strand at 2481.268 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 2,478,956 + +0.6 2,478,970 - -0.4 2,479,043 + Dsui_2323 0.15 -0.8 2,479,096 + Dsui_2323 0.26 +1.5 2,479,108 - +0.6 2,479,170 + Dsui_2323 0.42 +0.9 2,479,228 + Dsui_2323 0.54 +0.6 2,479,354 + Dsui_2323 0.81 -0.4 2,479,374 + Dsui_2323 0.85 -0.5 2,479,399 + +1.2 2,479,407 - +0.6 2,479,435 + -1.7 2,479,570 - Dsui_2324 0.19 -0.4 2,479,600 + Dsui_2324 0.27 -1.2 2,479,673 + Dsui_2324 0.47 -2.1 2,479,712 + Dsui_2324 0.57 -0.5 2,479,753 + Dsui_2324 0.69 -1.4 2,479,795 - Dsui_2324 0.80 -1.0 2,479,837 + -0.7 2,479,884 - -1.7 2,480,024 + -0.4 2,480,202 - Dsui_2325 0.65 +0.0 2,480,207 - Dsui_2325 0.66 -2.0 2,480,238 - Dsui_2325 0.74 +0.6 2,480,257 - Dsui_2325 0.79 -2.2 2,480,288 + -0.4 2,480,296 - Dsui_2325 0.88 -1.7 2,480,419 - +1.6 2,480,706 - Dsui_2326 0.88 -0.6 2,480,745 - +0.1 2,481,077 - Dsui_2327 0.54 -0.5 2,481,197 + -0.4 2,481,230 + +0.6 2,481,268 - +1.6
Or see this region's nucleotide sequence