Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2320 and Dsui_2321 are separated by 52 nucleotides Dsui_2321 and Dsui_2322 are separated by 45 nucleotides Dsui_2322 and Dsui_2323 are separated by 3 nucleotides
Dsui_2320: Dsui_2320 - Protein of unknown function (DUF2863), at 2,474,840 to 2,476,018
_2320
Dsui_2321: Dsui_2321 - site-specific recombinase, at 2,476,071 to 2,478,146
_2321
Dsui_2322: Dsui_2322 - hypothetical protein, at 2,478,192 to 2,478,968
_2322
Dsui_2323: Dsui_2323 - protein of unknown function (DUF1857), at 2,478,972 to 2,479,445
_2323
Position (kb)
2476
2477
2478
2479 Strain fitness (log2 ratio)
-2
-1
0
1 at 2475.103 kb on - strand, within Dsui_2320 at 2475.220 kb on + strand, within Dsui_2320 at 2475.376 kb on + strand, within Dsui_2320 at 2475.532 kb on + strand at 2475.598 kb on + strand at 2475.631 kb on + strand, within Dsui_2320 at 2475.698 kb on + strand at 2475.734 kb on + strand, within Dsui_2320 at 2475.830 kb on + strand at 2475.911 kb on - strand at 2475.981 kb on - strand at 2475.981 kb on - strand at 2476.020 kb on + strand at 2476.020 kb on + strand at 2476.028 kb on - strand at 2476.038 kb on - strand at 2476.051 kb on - strand at 2476.134 kb on + strand at 2476.344 kb on - strand, within Dsui_2321 at 2476.763 kb on - strand, within Dsui_2321 at 2476.937 kb on - strand, within Dsui_2321 at 2476.985 kb on + strand at 2477.021 kb on + strand at 2477.091 kb on + strand at 2477.165 kb on + strand, within Dsui_2321 at 2477.481 kb on - strand, within Dsui_2321 at 2477.500 kb on - strand, within Dsui_2321 at 2477.500 kb on - strand, within Dsui_2321 at 2477.515 kb on - strand, within Dsui_2321 at 2477.579 kb on + strand at 2477.625 kb on + strand at 2477.700 kb on - strand, within Dsui_2321 at 2477.701 kb on - strand, within Dsui_2321 at 2477.702 kb on - strand, within Dsui_2321 at 2477.705 kb on - strand, within Dsui_2321 at 2477.779 kb on + strand at 2477.808 kb on + strand at 2478.051 kb on - strand at 2478.129 kb on - strand at 2478.247 kb on + strand at 2478.377 kb on + strand, within Dsui_2322 at 2478.382 kb on + strand, within Dsui_2322 at 2478.415 kb on + strand, within Dsui_2322 at 2478.532 kb on - strand, within Dsui_2322 at 2478.568 kb on - strand, within Dsui_2322 at 2478.574 kb on - strand, within Dsui_2322 at 2478.593 kb on + strand, within Dsui_2322 at 2478.617 kb on + strand, within Dsui_2322 at 2478.625 kb on - strand at 2478.673 kb on + strand, within Dsui_2322 at 2478.682 kb on + strand, within Dsui_2322 at 2478.724 kb on - strand, within Dsui_2322 at 2478.749 kb on - strand, within Dsui_2322 at 2478.776 kb on + strand, within Dsui_2322 at 2478.837 kb on - strand at 2478.858 kb on + strand, within Dsui_2322 at 2478.877 kb on + strand, within Dsui_2322 at 2478.909 kb on - strand at 2478.956 kb on + strand at 2478.970 kb on - strand at 2479.043 kb on + strand, within Dsui_2323 at 2479.096 kb on + strand, within Dsui_2323 at 2479.108 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 2,475,103 - Dsui_2320 0.22 -0.2 2,475,220 + Dsui_2320 0.32 +0.6 2,475,376 + Dsui_2320 0.45 -2.0 2,475,532 + +0.6 2,475,598 + -0.4 2,475,631 + Dsui_2320 0.67 -2.2 2,475,698 + +0.6 2,475,734 + Dsui_2320 0.76 +0.6 2,475,830 + +0.6 2,475,911 - -0.3 2,475,981 - +0.3 2,475,981 - +0.1 2,476,020 + +0.6 2,476,020 + +0.6 2,476,028 - +0.2 2,476,038 - -0.2 2,476,051 - +0.2 2,476,134 + +0.6 2,476,344 - Dsui_2321 0.13 +0.6 2,476,763 - Dsui_2321 0.33 -1.4 2,476,937 - Dsui_2321 0.42 -2.2 2,476,985 + -1.4 2,477,021 + -1.0 2,477,091 + +0.6 2,477,165 + Dsui_2321 0.53 -0.4 2,477,481 - Dsui_2321 0.68 -1.0 2,477,500 - Dsui_2321 0.69 +0.6 2,477,500 - Dsui_2321 0.69 -1.4 2,477,515 - Dsui_2321 0.70 -2.7 2,477,579 + -0.4 2,477,625 + +0.6 2,477,700 - Dsui_2321 0.78 -0.4 2,477,701 - Dsui_2321 0.79 -1.9 2,477,702 - Dsui_2321 0.79 -2.6 2,477,705 - Dsui_2321 0.79 -0.4 2,477,779 + -0.4 2,477,808 + -0.4 2,478,051 - -1.7 2,478,129 - -0.4 2,478,247 + -2.2 2,478,377 + Dsui_2322 0.24 -0.3 2,478,382 + Dsui_2322 0.24 -0.4 2,478,415 + Dsui_2322 0.29 -1.0 2,478,532 - Dsui_2322 0.44 -1.0 2,478,568 - Dsui_2322 0.48 -0.4 2,478,574 - Dsui_2322 0.49 -1.0 2,478,593 + Dsui_2322 0.52 -2.3 2,478,617 + Dsui_2322 0.55 +0.6 2,478,625 - +0.6 2,478,673 + Dsui_2322 0.62 -0.4 2,478,682 + Dsui_2322 0.63 -1.3 2,478,724 - Dsui_2322 0.68 -1.0 2,478,749 - Dsui_2322 0.72 +0.6 2,478,776 + Dsui_2322 0.75 -0.4 2,478,837 - +0.6 2,478,858 + Dsui_2322 0.86 -1.4 2,478,877 + Dsui_2322 0.88 +0.0 2,478,909 - -1.0 2,478,956 + +0.6 2,478,970 - -0.4 2,479,043 + Dsui_2323 0.15 -0.8 2,479,096 + Dsui_2323 0.26 +1.5 2,479,108 - +0.6
Or see this region's nucleotide sequence