Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2313 and Dsui_2314 overlap by 4 nucleotides Dsui_2314 and Dsui_2315 overlap by 1 nucleotides Dsui_2315 and Dsui_2316 are separated by 10 nucleotides Dsui_2316 and Dsui_2317 are separated by 39 nucleotides
Dsui_2313: Dsui_2313 - CTP synthase, at 2,468,731 to 2,470,371
_2313
Dsui_2314: Dsui_2314 - 3-deoxy-8-phosphooctulonate synthase, at 2,470,368 to 2,471,207
_2314
Dsui_2315: Dsui_2315 - Stress responsive A/B Barrel Domain-containing protein, at 2,471,207 to 2,471,500
_2315
Dsui_2316: Dsui_2316 - hypothetical protein, at 2,471,511 to 2,471,801
_2316
Dsui_2317: Dsui_2317 - phosphopyruvate hydratase, at 2,471,841 to 2,473,124
_2317
Position (kb) 2470
2471
2472 Strain fitness (log2 ratio) -2
-1
0
1 at 2470.340 kb on + strand at 2471.171 kb on + strand at 2471.171 kb on + strand at 2471.176 kb on + strand at 2471.235 kb on - strand at 2471.238 kb on + strand, within Dsui_2315 at 2471.345 kb on - strand at 2471.437 kb on + strand, within Dsui_2315 at 2471.574 kb on - strand, within Dsui_2316 at 2471.703 kb on - strand, within Dsui_2316 at 2471.769 kb on + strand, within Dsui_2316
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 2,470,340 + +0.3 2,471,171 + -0.8 2,471,171 + +0.2 2,471,176 + +0.1 2,471,235 - -2.0 2,471,238 + Dsui_2315 0.11 +0.3 2,471,345 - +0.6 2,471,437 + Dsui_2315 0.78 +0.2 2,471,574 - Dsui_2316 0.22 -0.4 2,471,703 - Dsui_2316 0.66 -1.4 2,471,769 + Dsui_2316 0.89 +0.2
Or see this region's nucleotide sequence