Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2218 and Dsui_2219 are separated by 92 nucleotides Dsui_2219 and Dsui_2220 are separated by 199 nucleotides Dsui_2220 and Dsui_2221 are separated by 271 nucleotides
Dsui_2218: Dsui_2218 - 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase, at 2,358,076 to 2,359,284
_2218
Dsui_2219: Dsui_2219 - dihydrolipoamide dehydrogenase, at 2,359,377 to 2,360,801
_2219
Dsui_2220: Dsui_2220 - hypothetical protein, at 2,361,001 to 2,361,321
_2220
Dsui_2221: Dsui_2221 - putative ATPase, at 2,361,593 to 2,362,708
_2221
Position (kb)
2359
2360
2361 Strain fitness (log2 ratio)
-1
0
1 at 2359.311 kb on + strand at 2359.334 kb on + strand at 2360.795 kb on + strand at 2360.795 kb on + strand at 2360.843 kb on + strand at 2360.946 kb on + strand at 2360.951 kb on + strand at 2360.959 kb on - strand at 2360.973 kb on + strand at 2361.024 kb on - strand at 2361.028 kb on - strand at 2361.092 kb on + strand, within Dsui_2220 at 2361.136 kb on + strand at 2361.141 kb on - strand, within Dsui_2220 at 2361.180 kb on + strand at 2361.180 kb on - strand, within Dsui_2220 at 2361.188 kb on - strand, within Dsui_2220 at 2361.279 kb on - strand, within Dsui_2220 at 2361.377 kb on + strand at 2361.476 kb on + strand at 2361.479 kb on - strand at 2361.484 kb on - strand at 2361.484 kb on - strand at 2361.491 kb on + strand at 2361.538 kb on - strand at 2361.565 kb on + strand at 2361.608 kb on - strand at 2361.680 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 2,359,311 + +0.3 2,359,334 + +0.1 2,360,795 + +0.2 2,360,795 + +0.2 2,360,843 + +0.2 2,360,946 + -0.3 2,360,951 + -0.3 2,360,959 - -0.3 2,360,973 + -0.3 2,361,024 - +0.7 2,361,028 - +0.3 2,361,092 + Dsui_2220 0.28 -0.9 2,361,136 + +0.7 2,361,141 - Dsui_2220 0.44 +0.7 2,361,180 + +0.7 2,361,180 - Dsui_2220 0.56 -1.3 2,361,188 - Dsui_2220 0.58 -1.3 2,361,279 - Dsui_2220 0.87 +0.7 2,361,377 + +0.7 2,361,476 + +0.7 2,361,479 - -0.3 2,361,484 - -0.3 2,361,484 - -1.3 2,361,491 + +0.7 2,361,538 - -0.9 2,361,565 + +0.0 2,361,608 - +0.7 2,361,680 - -0.9
Or see this region's nucleotide sequence