Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2208 and Dsui_2209 are separated by 69 nucleotides Dsui_2209 and Dsui_2210 are separated by 188 nucleotides
Dsui_2208: Dsui_2208 - citrate lyase beta subunit, at 2,347,100 to 2,348,107
_2208
Dsui_2209: Dsui_2209 - malate dehydrogenase, at 2,348,177 to 2,349,163
_2209
Dsui_2210: Dsui_2210 - transcriptional regulator, at 2,349,352 to 2,350,092
_2210
Position (kb)
2348
2349
2350 Strain fitness (log2 ratio)
-1
0
1 at 2347.408 kb on - strand, within Dsui_2208 at 2347.454 kb on - strand, within Dsui_2208 at 2347.510 kb on + strand, within Dsui_2208 at 2347.611 kb on - strand, within Dsui_2208 at 2347.703 kb on - strand, within Dsui_2208 at 2347.744 kb on + strand, within Dsui_2208 at 2347.754 kb on + strand, within Dsui_2208 at 2347.885 kb on - strand, within Dsui_2208 at 2347.984 kb on - strand, within Dsui_2208 at 2347.989 kb on - strand, within Dsui_2208 at 2348.044 kb on - strand at 2348.091 kb on + strand at 2348.103 kb on + strand at 2349.289 kb on - strand at 2349.338 kb on + strand at 2349.338 kb on + strand at 2349.348 kb on + strand at 2349.368 kb on + strand at 2349.375 kb on + strand at 2349.383 kb on + strand at 2349.428 kb on + strand, within Dsui_2210 at 2349.439 kb on + strand, within Dsui_2210 at 2349.506 kb on + strand, within Dsui_2210 at 2349.589 kb on + strand, within Dsui_2210 at 2349.702 kb on + strand, within Dsui_2210 at 2349.703 kb on + strand, within Dsui_2210 at 2349.862 kb on + strand, within Dsui_2210 at 2349.977 kb on + strand, within Dsui_2210 at 2349.987 kb on + strand, within Dsui_2210 at 2350.081 kb on + strand at 2350.088 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 2,347,408 - Dsui_2208 0.31 -0.9 2,347,454 - Dsui_2208 0.35 +0.2 2,347,510 + Dsui_2208 0.41 -0.3 2,347,611 - Dsui_2208 0.51 -1.0 2,347,703 - Dsui_2208 0.60 -1.1 2,347,744 + Dsui_2208 0.64 -0.3 2,347,754 + Dsui_2208 0.65 -1.3 2,347,885 - Dsui_2208 0.78 -0.0 2,347,984 - Dsui_2208 0.88 -0.3 2,347,989 - Dsui_2208 0.88 -0.3 2,348,044 - -0.7 2,348,091 + +0.7 2,348,103 + -0.3 2,349,289 - -0.3 2,349,338 + +0.4 2,349,338 + +0.1 2,349,348 + +0.2 2,349,368 + -0.4 2,349,375 + -0.3 2,349,383 + -0.2 2,349,428 + Dsui_2210 0.10 -0.5 2,349,439 + Dsui_2210 0.12 -0.2 2,349,506 + Dsui_2210 0.21 -0.8 2,349,589 + Dsui_2210 0.32 -0.3 2,349,702 + Dsui_2210 0.47 -0.7 2,349,703 + Dsui_2210 0.47 -0.6 2,349,862 + Dsui_2210 0.69 -0.8 2,349,977 + Dsui_2210 0.84 -1.0 2,349,987 + Dsui_2210 0.86 -0.9 2,350,081 + -0.8 2,350,088 + +0.3
Or see this region's nucleotide sequence