Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2207 and Dsui_2208 are separated by 101 nucleotides Dsui_2208 and Dsui_2209 are separated by 69 nucleotides
Dsui_2207: Dsui_2207 - uncharacterized protein involved in response to NO, at 2,345,838 to 2,346,998
_2207
Dsui_2208: Dsui_2208 - citrate lyase beta subunit, at 2,347,100 to 2,348,107
_2208
Dsui_2209: Dsui_2209 - malate dehydrogenase, at 2,348,177 to 2,349,163
_2209
Position (kb)
2347
2348
2349 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2346.131 kb on + strand, within Dsui_2207 at 2346.131 kb on + strand, within Dsui_2207 at 2346.131 kb on + strand, within Dsui_2207 at 2346.155 kb on + strand at 2346.155 kb on + strand, within Dsui_2207 at 2346.193 kb on + strand at 2346.193 kb on - strand, within Dsui_2207 at 2346.237 kb on + strand, within Dsui_2207 at 2346.238 kb on - strand, within Dsui_2207 at 2346.254 kb on - strand, within Dsui_2207 at 2346.254 kb on - strand, within Dsui_2207 at 2346.299 kb on + strand, within Dsui_2207 at 2346.300 kb on + strand, within Dsui_2207 at 2346.308 kb on - strand, within Dsui_2207 at 2346.473 kb on + strand, within Dsui_2207 at 2346.473 kb on + strand, within Dsui_2207 at 2346.481 kb on - strand at 2346.481 kb on - strand, within Dsui_2207 at 2346.481 kb on - strand, within Dsui_2207 at 2346.481 kb on - strand, within Dsui_2207 at 2346.481 kb on - strand, within Dsui_2207 at 2346.481 kb on - strand, within Dsui_2207 at 2346.482 kb on - strand, within Dsui_2207 at 2346.592 kb on + strand, within Dsui_2207 at 2346.623 kb on - strand, within Dsui_2207 at 2346.735 kb on + strand, within Dsui_2207 at 2346.735 kb on + strand, within Dsui_2207 at 2346.738 kb on - strand, within Dsui_2207 at 2346.784 kb on + strand, within Dsui_2207 at 2346.857 kb on + strand, within Dsui_2207 at 2346.915 kb on + strand at 2346.916 kb on + strand at 2346.920 kb on + strand at 2347.001 kb on - strand at 2347.010 kb on - strand at 2347.023 kb on - strand at 2347.142 kb on + strand at 2347.408 kb on - strand, within Dsui_2208 at 2347.454 kb on - strand, within Dsui_2208 at 2347.510 kb on + strand, within Dsui_2208 at 2347.611 kb on - strand, within Dsui_2208 at 2347.703 kb on - strand, within Dsui_2208 at 2347.744 kb on + strand, within Dsui_2208 at 2347.754 kb on + strand, within Dsui_2208 at 2347.885 kb on - strand, within Dsui_2208 at 2347.984 kb on - strand, within Dsui_2208 at 2347.989 kb on - strand, within Dsui_2208 at 2348.044 kb on - strand at 2348.091 kb on + strand at 2348.103 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 2,346,131 + Dsui_2207 0.25 +0.8 2,346,131 + Dsui_2207 0.25 -0.2 2,346,131 + Dsui_2207 0.25 +0.8 2,346,155 + -0.2 2,346,155 + Dsui_2207 0.27 -0.2 2,346,193 + +0.8 2,346,193 - Dsui_2207 0.31 -1.8 2,346,237 + Dsui_2207 0.34 -0.2 2,346,238 - Dsui_2207 0.34 -1.2 2,346,254 - Dsui_2207 0.36 +0.8 2,346,254 - Dsui_2207 0.36 -1.8 2,346,299 + Dsui_2207 0.40 -2.4 2,346,300 + Dsui_2207 0.40 -1.6 2,346,308 - Dsui_2207 0.40 -0.8 2,346,473 + Dsui_2207 0.55 +0.8 2,346,473 + Dsui_2207 0.55 +1.8 2,346,481 - +0.8 2,346,481 - Dsui_2207 0.55 -0.8 2,346,481 - Dsui_2207 0.55 -1.2 2,346,481 - Dsui_2207 0.55 -0.8 2,346,481 - Dsui_2207 0.55 -0.8 2,346,481 - Dsui_2207 0.55 +0.8 2,346,482 - Dsui_2207 0.55 +0.8 2,346,592 + Dsui_2207 0.65 -0.2 2,346,623 - Dsui_2207 0.68 -0.2 2,346,735 + Dsui_2207 0.77 -0.8 2,346,735 + Dsui_2207 0.77 -0.8 2,346,738 - Dsui_2207 0.78 -1.8 2,346,784 + Dsui_2207 0.81 -0.2 2,346,857 + Dsui_2207 0.88 -3.0 2,346,915 + +0.8 2,346,916 + +0.8 2,346,920 + -1.6 2,347,001 - -1.6 2,347,010 - -1.2 2,347,023 - -0.8 2,347,142 + +0.7 2,347,408 - Dsui_2208 0.31 -0.9 2,347,454 - Dsui_2208 0.35 +0.2 2,347,510 + Dsui_2208 0.41 -0.3 2,347,611 - Dsui_2208 0.51 -1.0 2,347,703 - Dsui_2208 0.60 -1.1 2,347,744 + Dsui_2208 0.64 -0.3 2,347,754 + Dsui_2208 0.65 -1.3 2,347,885 - Dsui_2208 0.78 -0.0 2,347,984 - Dsui_2208 0.88 -0.3 2,347,989 - Dsui_2208 0.88 -0.3 2,348,044 - -0.7 2,348,091 + +0.7 2,348,103 + -0.3
Or see this region's nucleotide sequence