Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2183 and Dsui_2184 are separated by 114 nucleotides Dsui_2184 and Dsui_2185 are separated by 71 nucleotides Dsui_2185 and Dsui_2186 are separated by 185 nucleotides Dsui_2186 and Dsui_2187 are separated by 70 nucleotides
Dsui_2183: Dsui_2183 - aldose 1-epimerase-like enzyme, at 2,318,747 to 2,319,619
_2183
Dsui_2184: Dsui_2184 - hypothetical protein, at 2,319,734 to 2,320,282
_2184
Dsui_2185: Dsui_2185 - DNA-3-methyladenine glycosylase I, at 2,320,354 to 2,320,926
_2185
Dsui_2186: Dsui_2186 - Protein of unknown function (DUF3567), at 2,321,112 to 2,321,345
_2186
Dsui_2187: Dsui_2187 - acyl-CoA synthetase/AMP-acid ligase, at 2,321,416 to 2,323,113
_2187
Position (kb)
2320
2321 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2319.369 kb on - strand, within Dsui_2183 at 2319.402 kb on - strand, within Dsui_2183 at 2319.564 kb on - strand at 2319.874 kb on + strand at 2319.977 kb on + strand, within Dsui_2184 at 2320.260 kb on - strand at 2320.299 kb on - strand at 2320.402 kb on + strand at 2320.425 kb on + strand, within Dsui_2185 at 2320.477 kb on - strand at 2320.619 kb on - strand, within Dsui_2185 at 2320.650 kb on + strand at 2320.697 kb on + strand at 2320.784 kb on + strand, within Dsui_2185 at 2320.901 kb on - strand at 2320.978 kb on + strand at 2321.011 kb on + strand at 2321.018 kb on - strand at 2321.045 kb on - strand at 2321.155 kb on + strand, within Dsui_2186 at 2321.317 kb on + strand, within Dsui_2186 at 2321.353 kb on - strand at 2321.435 kb on - strand at 2321.534 kb on + strand at 2321.542 kb on - strand at 2321.542 kb on - strand at 2321.660 kb on - strand at 2321.833 kb on - strand at 2321.852 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 2,319,369 - Dsui_2183 0.71 +1.8 2,319,402 - Dsui_2183 0.75 -0.4 2,319,564 - -0.2 2,319,874 + +0.8 2,319,977 + Dsui_2184 0.44 -1.2 2,320,260 - -2.0 2,320,299 - -1.2 2,320,402 + -0.2 2,320,425 + Dsui_2185 0.12 -0.8 2,320,477 - +0.8 2,320,619 - Dsui_2185 0.46 -0.2 2,320,650 + +0.8 2,320,697 + +0.8 2,320,784 + Dsui_2185 0.75 -0.8 2,320,901 - +0.8 2,320,978 + +0.8 2,321,011 + -0.8 2,321,018 - +0.8 2,321,045 - -0.2 2,321,155 + Dsui_2186 0.18 -0.1 2,321,317 + Dsui_2186 0.88 -0.2 2,321,353 - +0.8 2,321,435 - -1.2 2,321,534 + +0.8 2,321,542 - -1.2 2,321,542 - -0.2 2,321,660 - -0.8 2,321,833 - +0.8 2,321,852 + +0.8
Or see this region's nucleotide sequence