Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2113 and Dsui_2114 are separated by 2 nucleotides Dsui_2114 and Dsui_2115 are separated by 280 nucleotides Dsui_2115 and Dsui_2116 are separated by 139 nucleotides
Dsui_2113: Dsui_2113 - serine acetyltransferase, at 2,238,693 to 2,239,691
_2113
Dsui_2114: Dsui_2114 - Rhodanese-related sulfurtransferase, at 2,239,694 to 2,240,236
_2114
Dsui_2115: Dsui_2115 - transcriptional regulator, at 2,240,517 to 2,241,470
_2115
Dsui_2116: Dsui_2116 - Fe-dependent oxidoreductase, alcohol dehydrogenase, at 2,241,610 to 2,242,758
_2116
Position (kb)
2240
2241
2242 Strain fitness (log2 ratio)
-2
-1
0
1 at 2239.692 kb on + strand at 2240.165 kb on + strand, within Dsui_2114 at 2240.173 kb on - strand at 2240.309 kb on - strand at 2240.491 kb on - strand at 2240.770 kb on + strand, within Dsui_2115 at 2240.817 kb on - strand, within Dsui_2115 at 2240.829 kb on - strand, within Dsui_2115 at 2240.963 kb on - strand, within Dsui_2115 at 2240.963 kb on - strand, within Dsui_2115 at 2241.200 kb on - strand, within Dsui_2115 at 2241.248 kb on + strand, within Dsui_2115 at 2241.404 kb on + strand at 2241.582 kb on + strand at 2241.592 kb on + strand at 2241.627 kb on + strand at 2241.635 kb on - strand at 2241.635 kb on - strand at 2241.761 kb on - strand at 2241.763 kb on + strand, within Dsui_2116 at 2241.794 kb on - strand at 2241.884 kb on - strand, within Dsui_2116 at 2241.884 kb on - strand, within Dsui_2116 at 2241.905 kb on + strand at 2242.053 kb on + strand at 2242.133 kb on - strand, within Dsui_2116 at 2242.330 kb on + strand, within Dsui_2116 at 2242.377 kb on + strand, within Dsui_2116 at 2242.406 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 2,239,692 + +0.8 2,240,165 + Dsui_2114 0.87 -0.2 2,240,173 - +0.8 2,240,309 - -0.2 2,240,491 - -1.2 2,240,770 + Dsui_2115 0.27 -2.0 2,240,817 - Dsui_2115 0.31 -0.2 2,240,829 - Dsui_2115 0.33 +0.8 2,240,963 - Dsui_2115 0.47 -0.2 2,240,963 - Dsui_2115 0.47 -0.8 2,241,200 - Dsui_2115 0.72 -2.0 2,241,248 + Dsui_2115 0.77 +0.8 2,241,404 + -1.2 2,241,582 + +0.8 2,241,592 + -0.2 2,241,627 + -0.2 2,241,635 - -1.2 2,241,635 - -0.2 2,241,761 - -0.2 2,241,763 + Dsui_2116 0.13 +0.8 2,241,794 - +0.8 2,241,884 - Dsui_2116 0.24 -0.8 2,241,884 - Dsui_2116 0.24 -0.8 2,241,905 + +0.8 2,242,053 + +0.8 2,242,133 - Dsui_2116 0.46 -2.2 2,242,330 + Dsui_2116 0.63 -1.5 2,242,377 + Dsui_2116 0.67 +0.8 2,242,406 + +0.8
Or see this region's nucleotide sequence