Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2025 and Dsui_2026 are separated by 9 nucleotides Dsui_2026 and Dsui_2027 are separated by 17 nucleotides
Dsui_2025: Dsui_2025 - RND family efflux transporter, MFP subunit, at 2,141,088 to 2,142,275
_2025
Dsui_2026: Dsui_2026 - hydrophobe/amphiphile efflux-1 (HAE1) family transporter, at 2,142,285 to 2,145,482
_2026
Dsui_2027: Dsui_2027 - efflux transporter, outer membrane factor lipoprotein, NodT family, at 2,145,500 to 2,147,065
_2027
Position (kb)
2142
2143
2144
2145
2146 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2141.296 kb on + strand, within Dsui_2025 at 2141.381 kb on + strand at 2141.401 kb on - strand at 2141.475 kb on + strand, within Dsui_2025 at 2141.577 kb on - strand, within Dsui_2025 at 2141.598 kb on - strand, within Dsui_2025 at 2141.599 kb on - strand at 2141.665 kb on + strand, within Dsui_2025 at 2141.673 kb on - strand at 2141.710 kb on + strand at 2141.755 kb on + strand, within Dsui_2025 at 2141.885 kb on - strand at 2141.961 kb on + strand, within Dsui_2025 at 2142.008 kb on + strand, within Dsui_2025 at 2142.008 kb on + strand, within Dsui_2025 at 2142.269 kb on + strand at 2142.269 kb on + strand at 2142.278 kb on - strand at 2142.329 kb on + strand at 2142.335 kb on + strand at 2142.402 kb on - strand at 2142.430 kb on + strand at 2142.448 kb on + strand at 2142.535 kb on - strand at 2142.609 kb on + strand at 2142.693 kb on + strand at 2142.700 kb on + strand, within Dsui_2026 at 2142.700 kb on + strand at 2142.702 kb on - strand, within Dsui_2026 at 2142.742 kb on + strand at 2142.757 kb on + strand at 2142.913 kb on + strand, within Dsui_2026 at 2143.209 kb on - strand, within Dsui_2026 at 2143.249 kb on + strand at 2143.249 kb on + strand, within Dsui_2026 at 2143.270 kb on + strand, within Dsui_2026 at 2143.314 kb on + strand, within Dsui_2026 at 2143.322 kb on - strand at 2143.488 kb on + strand, within Dsui_2026 at 2143.727 kb on + strand at 2143.744 kb on + strand, within Dsui_2026 at 2143.939 kb on + strand, within Dsui_2026 at 2143.993 kb on + strand at 2144.014 kb on + strand at 2144.022 kb on - strand, within Dsui_2026 at 2144.042 kb on + strand, within Dsui_2026 at 2144.063 kb on - strand at 2144.089 kb on + strand, within Dsui_2026 at 2144.330 kb on + strand at 2144.386 kb on - strand, within Dsui_2026 at 2144.396 kb on - strand, within Dsui_2026 at 2144.493 kb on + strand, within Dsui_2026 at 2144.532 kb on - strand at 2144.572 kb on + strand at 2144.572 kb on + strand, within Dsui_2026 at 2144.572 kb on + strand, within Dsui_2026 at 2144.572 kb on + strand at 2144.621 kb on + strand at 2144.623 kb on - strand at 2144.629 kb on - strand at 2144.696 kb on + strand, within Dsui_2026 at 2144.859 kb on - strand, within Dsui_2026 at 2144.876 kb on + strand at 2144.935 kb on - strand, within Dsui_2026 at 2145.097 kb on + strand, within Dsui_2026 at 2145.176 kb on - strand at 2145.326 kb on + strand at 2145.329 kb on - strand at 2145.343 kb on + strand at 2145.397 kb on + strand at 2145.409 kb on - strand at 2145.471 kb on - strand at 2145.490 kb on + strand at 2145.538 kb on + strand at 2145.633 kb on + strand at 2145.734 kb on + strand at 2145.768 kb on - strand, within Dsui_2027 at 2145.790 kb on + strand, within Dsui_2027 at 2145.798 kb on - strand at 2145.894 kb on - strand at 2146.116 kb on - strand at 2146.130 kb on - strand at 2146.143 kb on + strand at 2146.151 kb on - strand at 2146.199 kb on + strand at 2146.450 kb on + strand, within Dsui_2027
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 2,141,296 + Dsui_2025 0.18 -2.0 2,141,381 + -0.2 2,141,401 - +0.8 2,141,475 + Dsui_2025 0.33 -2.4 2,141,577 - Dsui_2025 0.41 -1.2 2,141,598 - Dsui_2025 0.43 -0.2 2,141,599 - +0.8 2,141,665 + Dsui_2025 0.49 -1.5 2,141,673 - +0.8 2,141,710 + +0.8 2,141,755 + Dsui_2025 0.56 +0.8 2,141,885 - +0.8 2,141,961 + Dsui_2025 0.73 +0.8 2,142,008 + Dsui_2025 0.77 +0.8 2,142,008 + Dsui_2025 0.77 +0.8 2,142,269 + -1.2 2,142,269 + -0.2 2,142,278 - -0.2 2,142,329 + -0.2 2,142,335 + +0.8 2,142,402 - -0.2 2,142,430 + -0.2 2,142,448 + -1.2 2,142,535 - +0.8 2,142,609 + +0.8 2,142,693 + -0.2 2,142,700 + Dsui_2026 0.13 -0.2 2,142,700 + -0.2 2,142,702 - Dsui_2026 0.13 -0.8 2,142,742 + +0.8 2,142,757 + +0.8 2,142,913 + Dsui_2026 0.20 +1.8 2,143,209 - Dsui_2026 0.29 -0.2 2,143,249 + -0.2 2,143,249 + Dsui_2026 0.30 -2.0 2,143,270 + Dsui_2026 0.31 +0.8 2,143,314 + Dsui_2026 0.32 -1.2 2,143,322 - +0.8 2,143,488 + Dsui_2026 0.38 -1.2 2,143,727 + -0.2 2,143,744 + Dsui_2026 0.46 -1.2 2,143,939 + Dsui_2026 0.52 -1.2 2,143,993 + +0.8 2,144,014 + -0.2 2,144,022 - Dsui_2026 0.54 -1.8 2,144,042 + Dsui_2026 0.55 -0.2 2,144,063 - -0.2 2,144,089 + Dsui_2026 0.56 +0.8 2,144,330 + +0.8 2,144,386 - Dsui_2026 0.66 +0.1 2,144,396 - Dsui_2026 0.66 -0.8 2,144,493 + Dsui_2026 0.69 +0.8 2,144,532 - +0.8 2,144,572 + +0.8 2,144,572 + Dsui_2026 0.72 -1.2 2,144,572 + Dsui_2026 0.72 -1.2 2,144,572 + -0.2 2,144,621 + +0.8 2,144,623 - -0.2 2,144,629 - +0.8 2,144,696 + Dsui_2026 0.75 +0.8 2,144,859 - Dsui_2026 0.80 +1.8 2,144,876 + +0.8 2,144,935 - Dsui_2026 0.83 +0.8 2,145,097 + Dsui_2026 0.88 -1.5 2,145,176 - +0.8 2,145,326 + -0.2 2,145,329 - -0.2 2,145,343 + -1.8 2,145,397 + +0.8 2,145,409 - +0.8 2,145,471 - +0.8 2,145,490 + -0.2 2,145,538 + -0.2 2,145,633 + -0.2 2,145,734 + -0.2 2,145,768 - Dsui_2027 0.17 -1.5 2,145,790 + Dsui_2027 0.19 -3.2 2,145,798 - +0.8 2,145,894 - -0.2 2,146,116 - -0.8 2,146,130 - +0.8 2,146,143 + +0.8 2,146,151 - +0.8 2,146,199 + +0.8 2,146,450 + Dsui_2027 0.61 -1.2
Or see this region's nucleotide sequence