Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1600 and Dsui_1601 are separated by 27 nucleotides Dsui_1601 and Dsui_1602 are separated by 142 nucleotides Dsui_1602 and Dsui_1603 are separated by 198 nucleotides
Dsui_1600: Dsui_1600 - putative enzyme of heme biosynthesis, at 1,680,831 to 1,681,916
_1600
Dsui_1601: Dsui_1601 - uroporphyrinogen-III synthase, at 1,681,944 to 1,682,711
_1601
Dsui_1602: Dsui_1602 - porphobilinogen deaminase, at 1,682,854 to 1,683,813
_1602
Dsui_1603: Dsui_1603 - phosphoenolpyruvate carboxylase, at 1,684,012 to 1,686,819
_1603
Position (kb)
1682
1683
1684 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1681.890 kb on - strand at 1681.919 kb on - strand at 1681.930 kb on - strand at 1682.738 kb on + strand at 1682.762 kb on + strand at 1682.774 kb on - strand at 1682.779 kb on + strand at 1682.846 kb on - strand at 1682.859 kb on + strand at 1682.865 kb on - strand at 1682.869 kb on + strand at 1682.872 kb on - strand at 1682.872 kb on - strand at 1682.872 kb on - strand at 1684.246 kb on + strand at 1684.262 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 1,681,890 - -3.0 1,681,919 - -2.1 1,681,930 - -2.7 1,682,738 + +0.4 1,682,762 + +0.4 1,682,774 - -0.1 1,682,779 + -1.2 1,682,846 - -0.5 1,682,859 + -0.6 1,682,865 - -3.1 1,682,869 + +0.4 1,682,872 - -0.0 1,682,872 - -0.7 1,682,872 - -0.4 1,684,246 + -0.6 1,684,262 + -0.6
Or see this region's nucleotide sequence