Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1305 and Dsui_1306 are separated by 189 nucleotides Dsui_1306 and Dsui_1307 are separated by 67 nucleotides Dsui_1307 and Dsui_1308 are separated by 32 nucleotides
Dsui_1305: Dsui_1305 - ribosome biogenesis GTP-binding protein YsxC/EngB, at 1,366,911 to 1,367,669
_1305
Dsui_1306: Dsui_1306 - delta-aminolevulinic acid dehydratase, at 1,367,859 to 1,368,869
_1306
Dsui_1307: Dsui_1307 - transcriptional regulator, at 1,368,937 to 1,369,533
_1307
Dsui_1308: Dsui_1308 - pyrimidine 5''-nucleotidase, at 1,369,566 to 1,370,243
_1308
Position (kb)
1367
1368
1369 Strain fitness (log2 ratio)
-2
-1
0
1 at 1366.873 kb on + strand at 1366.909 kb on + strand at 1367.600 kb on + strand at 1367.653 kb on - strand at 1367.653 kb on - strand at 1367.679 kb on + strand at 1367.680 kb on + strand at 1367.681 kb on + strand at 1367.686 kb on + strand at 1367.688 kb on - strand at 1367.743 kb on + strand at 1367.749 kb on + strand at 1367.759 kb on + strand at 1367.785 kb on + strand at 1367.786 kb on + strand at 1367.792 kb on + strand at 1367.795 kb on - strand at 1367.795 kb on - strand at 1367.803 kb on + strand at 1367.842 kb on + strand at 1367.842 kb on + strand at 1367.842 kb on + strand at 1367.842 kb on + strand at 1367.842 kb on + strand at 1368.954 kb on + strand at 1369.067 kb on - strand, within Dsui_1307 at 1369.209 kb on - strand, within Dsui_1307 at 1369.221 kb on + strand, within Dsui_1307 at 1369.248 kb on + strand, within Dsui_1307 at 1369.285 kb on - strand, within Dsui_1307 at 1369.372 kb on + strand, within Dsui_1307 at 1369.372 kb on + strand, within Dsui_1307 at 1369.380 kb on - strand, within Dsui_1307 at 1369.380 kb on - strand, within Dsui_1307 at 1369.418 kb on - strand, within Dsui_1307 at 1369.460 kb on + strand, within Dsui_1307 at 1369.468 kb on - strand, within Dsui_1307 at 1369.468 kb on - strand, within Dsui_1307 at 1369.529 kb on + strand at 1369.537 kb on + strand at 1369.547 kb on - strand at 1369.582 kb on + strand at 1369.590 kb on - strand at 1369.590 kb on - strand at 1369.616 kb on + strand at 1369.693 kb on + strand, within Dsui_1308 at 1369.716 kb on + strand, within Dsui_1308 at 1369.751 kb on - strand, within Dsui_1308
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 1,366,873 + -0.1 1,366,909 + +0.0 1,367,600 + +0.2 1,367,653 - -0.2 1,367,653 - +0.3 1,367,679 + -1.9 1,367,680 + -0.6 1,367,681 + -2.2 1,367,686 + -0.6 1,367,688 - -0.6 1,367,743 + +0.4 1,367,749 + -1.2 1,367,759 + +0.4 1,367,785 + -1.1 1,367,786 + +0.4 1,367,792 + -0.9 1,367,795 - -1.2 1,367,795 - -0.3 1,367,803 + -0.5 1,367,842 + -0.4 1,367,842 + -0.2 1,367,842 + -0.6 1,367,842 + -0.7 1,367,842 + -0.1 1,368,954 + -1.2 1,369,067 - Dsui_1307 0.22 -0.4 1,369,209 - Dsui_1307 0.46 -0.1 1,369,221 + Dsui_1307 0.48 +0.4 1,369,248 + Dsui_1307 0.52 +0.4 1,369,285 - Dsui_1307 0.58 -0.6 1,369,372 + Dsui_1307 0.73 +0.4 1,369,372 + Dsui_1307 0.73 -1.6 1,369,380 - Dsui_1307 0.74 -0.2 1,369,380 - Dsui_1307 0.74 -0.2 1,369,418 - Dsui_1307 0.81 -0.1 1,369,460 + Dsui_1307 0.88 +0.4 1,369,468 - Dsui_1307 0.89 -0.6 1,369,468 - Dsui_1307 0.89 -0.4 1,369,529 + +0.4 1,369,537 + +0.4 1,369,547 - -0.4 1,369,582 + -0.6 1,369,590 - +0.1 1,369,590 - -1.0 1,369,616 + -0.6 1,369,693 + Dsui_1308 0.19 -1.9 1,369,716 + Dsui_1308 0.22 +0.4 1,369,751 - Dsui_1308 0.27 -0.6
Or see this region's nucleotide sequence