Strain Fitness in Dechlorosoma suillum PS around Dsui_1306

Experiment: propionate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_1305 and Dsui_1306 are separated by 189 nucleotidesDsui_1306 and Dsui_1307 are separated by 67 nucleotidesDsui_1307 and Dsui_1308 are separated by 32 nucleotides Dsui_1305: Dsui_1305 - ribosome biogenesis GTP-binding protein YsxC/EngB, at 1,366,911 to 1,367,669 _1305 Dsui_1306: Dsui_1306 - delta-aminolevulinic acid dehydratase, at 1,367,859 to 1,368,869 _1306 Dsui_1307: Dsui_1307 - transcriptional regulator, at 1,368,937 to 1,369,533 _1307 Dsui_1308: Dsui_1308 - pyrimidine 5''-nucleotidase, at 1,369,566 to 1,370,243 _1308 Position (kb) 1367 1368 1369Strain fitness (log2 ratio) -2 -1 0 1at 1366.873 kb on + strandat 1366.909 kb on + strandat 1367.600 kb on + strandat 1367.653 kb on - strandat 1367.653 kb on - strandat 1367.679 kb on + strandat 1367.680 kb on + strandat 1367.681 kb on + strandat 1367.686 kb on + strandat 1367.688 kb on - strandat 1367.743 kb on + strandat 1367.749 kb on + strandat 1367.759 kb on + strandat 1367.785 kb on + strandat 1367.786 kb on + strandat 1367.792 kb on + strandat 1367.795 kb on - strandat 1367.795 kb on - strandat 1367.803 kb on + strandat 1367.842 kb on + strandat 1367.842 kb on + strandat 1367.842 kb on + strandat 1367.842 kb on + strandat 1367.842 kb on + strandat 1368.954 kb on + strandat 1369.067 kb on - strand, within Dsui_1307at 1369.209 kb on - strand, within Dsui_1307at 1369.221 kb on + strand, within Dsui_1307at 1369.248 kb on + strand, within Dsui_1307at 1369.285 kb on - strand, within Dsui_1307at 1369.372 kb on + strand, within Dsui_1307at 1369.372 kb on + strand, within Dsui_1307at 1369.380 kb on - strand, within Dsui_1307at 1369.380 kb on - strand, within Dsui_1307at 1369.418 kb on - strand, within Dsui_1307at 1369.460 kb on + strand, within Dsui_1307at 1369.468 kb on - strand, within Dsui_1307at 1369.468 kb on - strand, within Dsui_1307at 1369.529 kb on + strandat 1369.537 kb on + strandat 1369.547 kb on - strandat 1369.582 kb on + strandat 1369.590 kb on - strandat 1369.590 kb on - strandat 1369.616 kb on + strandat 1369.693 kb on + strand, within Dsui_1308at 1369.716 kb on + strand, within Dsui_1308at 1369.751 kb on - strand, within Dsui_1308

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Per-strain Table

Position Strand Gene LocusTag Fraction propionate (C)
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1,366,873 + -0.1
1,366,909 + +0.0
1,367,600 + +0.2
1,367,653 - -0.2
1,367,653 - +0.3
1,367,679 + -1.9
1,367,680 + -0.6
1,367,681 + -2.2
1,367,686 + -0.6
1,367,688 - -0.6
1,367,743 + +0.4
1,367,749 + -1.2
1,367,759 + +0.4
1,367,785 + -1.1
1,367,786 + +0.4
1,367,792 + -0.9
1,367,795 - -1.2
1,367,795 - -0.3
1,367,803 + -0.5
1,367,842 + -0.4
1,367,842 + -0.2
1,367,842 + -0.6
1,367,842 + -0.7
1,367,842 + -0.1
1,368,954 + -1.2
1,369,067 - Dsui_1307 0.22 -0.4
1,369,209 - Dsui_1307 0.46 -0.1
1,369,221 + Dsui_1307 0.48 +0.4
1,369,248 + Dsui_1307 0.52 +0.4
1,369,285 - Dsui_1307 0.58 -0.6
1,369,372 + Dsui_1307 0.73 +0.4
1,369,372 + Dsui_1307 0.73 -1.6
1,369,380 - Dsui_1307 0.74 -0.2
1,369,380 - Dsui_1307 0.74 -0.2
1,369,418 - Dsui_1307 0.81 -0.1
1,369,460 + Dsui_1307 0.88 +0.4
1,369,468 - Dsui_1307 0.89 -0.6
1,369,468 - Dsui_1307 0.89 -0.4
1,369,529 + +0.4
1,369,537 + +0.4
1,369,547 - -0.4
1,369,582 + -0.6
1,369,590 - +0.1
1,369,590 - -1.0
1,369,616 + -0.6
1,369,693 + Dsui_1308 0.19 -1.9
1,369,716 + Dsui_1308 0.22 +0.4
1,369,751 - Dsui_1308 0.27 -0.6

Or see this region's nucleotide sequence