Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0519 and Dsui_0520 are separated by 330 nucleotides Dsui_0520 and Dsui_0521 are separated by 75 nucleotides Dsui_0521 and Dsui_0522 are separated by 94 nucleotides
Dsui_0519: Dsui_0519 - Methylmalonyl-CoA mutase (EC 5.4.99.2) <small>(from data)</small>, at 525,068 to 527,233
_0519
Dsui_0520: Dsui_0520 - transcriptional regulator, at 527,564 to 528,220
_0520
Dsui_0521: Dsui_0521 - enoyl-CoA hydratase/carnithine racemase, at 528,296 to 529,072
_0521
Dsui_0522: Dsui_0522 - SSS sodium solute transporter, at 529,167 to 530,840
_0522
Position (kb) 527
528
529 Strain fitness (log2 ratio) -8
-7
-6
-5
-4
-3
-2
-1
0
1 at 526.572 kb on + strand, within Dsui_0519 at 526.613 kb on - strand, within Dsui_0519 at 526.638 kb on - strand, within Dsui_0519 at 526.666 kb on + strand, within Dsui_0519 at 526.843 kb on + strand, within Dsui_0519 at 526.843 kb on + strand, within Dsui_0519 at 526.881 kb on - strand, within Dsui_0519 at 526.890 kb on - strand, within Dsui_0519 at 526.983 kb on + strand at 527.026 kb on + strand at 527.060 kb on + strand at 527.063 kb on - strand at 527.129 kb on - strand at 527.169 kb on + strand at 527.177 kb on - strand at 527.177 kb on - strand at 527.233 kb on + strand at 527.234 kb on - strand at 527.241 kb on - strand at 527.247 kb on + strand at 527.302 kb on - strand at 527.511 kb on - strand at 527.563 kb on + strand at 527.674 kb on + strand, within Dsui_0520 at 527.720 kb on + strand, within Dsui_0520 at 527.754 kb on + strand, within Dsui_0520 at 527.791 kb on + strand, within Dsui_0520 at 527.791 kb on + strand, within Dsui_0520 at 527.883 kb on + strand, within Dsui_0520 at 527.952 kb on + strand, within Dsui_0520 at 527.953 kb on + strand, within Dsui_0520 at 527.960 kb on - strand, within Dsui_0520 at 527.960 kb on - strand, within Dsui_0520 at 528.101 kb on + strand, within Dsui_0520 at 528.168 kb on - strand at 528.194 kb on + strand at 528.205 kb on + strand at 528.207 kb on - strand at 528.347 kb on - strand at 528.347 kb on - strand at 528.429 kb on + strand, within Dsui_0521 at 528.442 kb on - strand, within Dsui_0521 at 528.530 kb on + strand, within Dsui_0521 at 528.594 kb on + strand, within Dsui_0521 at 528.596 kb on - strand, within Dsui_0521 at 528.599 kb on + strand, within Dsui_0521 at 528.692 kb on + strand, within Dsui_0521 at 528.827 kb on + strand, within Dsui_0521 at 528.846 kb on - strand, within Dsui_0521 at 528.854 kb on + strand, within Dsui_0521 at 528.856 kb on + strand, within Dsui_0521 at 528.940 kb on + strand, within Dsui_0521 at 528.967 kb on - strand, within Dsui_0521 at 528.967 kb on - strand, within Dsui_0521 at 529.045 kb on + strand at 529.055 kb on + strand at 529.123 kb on - strand at 529.200 kb on + strand at 529.200 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 526,572 + Dsui_0519 0.69 -1.5 526,613 - Dsui_0519 0.71 -6.2 526,638 - Dsui_0519 0.72 -6.0 526,666 + Dsui_0519 0.74 -0.5 526,843 + Dsui_0519 0.82 +0.5 526,843 + Dsui_0519 0.82 +0.5 526,881 - Dsui_0519 0.84 -4.8 526,890 - Dsui_0519 0.84 -7.8 526,983 + +0.5 527,026 + +0.5 527,060 + -1.8 527,063 - -4.4 527,129 - -4.5 527,169 + +0.5 527,177 - -6.7 527,177 - -1.8 527,233 + -0.5 527,234 - -4.6 527,241 - -4.5 527,247 + -1.5 527,302 - -5.3 527,511 - +0.5 527,563 + +0.6 527,674 + Dsui_0520 0.17 -2.6 527,720 + Dsui_0520 0.24 -2.9 527,754 + Dsui_0520 0.29 -1.0 527,791 + Dsui_0520 0.35 -2.5 527,791 + Dsui_0520 0.35 -1.5 527,883 + Dsui_0520 0.49 -2.1 527,952 + Dsui_0520 0.59 -2.6 527,953 + Dsui_0520 0.59 -2.3 527,960 - Dsui_0520 0.60 +0.5 527,960 - Dsui_0520 0.60 +0.5 528,101 + Dsui_0520 0.82 -2.7 528,168 - -1.0 528,194 + -0.2 528,205 + +0.3 528,207 - +0.5 528,347 - -2.8 528,347 - -0.5 528,429 + Dsui_0521 0.17 -0.5 528,442 - Dsui_0521 0.19 -1.0 528,530 + Dsui_0521 0.30 +0.5 528,594 + Dsui_0521 0.38 +0.5 528,596 - Dsui_0521 0.39 -0.5 528,599 + Dsui_0521 0.39 -1.8 528,692 + Dsui_0521 0.51 -2.0 528,827 + Dsui_0521 0.68 -0.0 528,846 - Dsui_0521 0.71 -0.5 528,854 + Dsui_0521 0.72 -1.5 528,856 + Dsui_0521 0.72 -0.5 528,940 + Dsui_0521 0.83 -2.6 528,967 - Dsui_0521 0.86 -1.5 528,967 - Dsui_0521 0.86 -0.5 529,045 + -1.7 529,055 + -0.9 529,123 - +0.5 529,200 + +1.1 529,200 + -1.0
Or see this region's nucleotide sequence