Strain Fitness in Dechlorosoma suillum PS around Dsui_0517

Experiment: propionate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_0516 and Dsui_0517 are separated by 20 nucleotidesDsui_0517 and Dsui_0518 are separated by 47 nucleotides Dsui_0516: Dsui_0516 - Propionyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.3) (from data), at 520,438 to 522,429 _0516 Dsui_0517: Dsui_0517 - Propionyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.3) (from data), at 522,450 to 523,982 _0517 Dsui_0518: Dsui_0518 - methylmalonyl-CoA-mutase-associated GTPase MeaB (from data), at 524,030 to 525,058 _0518 Position (kb) 522 523 524Strain fitness (log2 ratio) -6 -5 -4 -3 -2 -1 0 1at 521.463 kb on - strand, within Dsui_0516at 521.513 kb on - strand, within Dsui_0516at 521.547 kb on + strand, within Dsui_0516at 521.649 kb on - strand, within Dsui_0516at 521.649 kb on - strand, within Dsui_0516at 521.725 kb on - strand, within Dsui_0516at 521.858 kb on - strand, within Dsui_0516at 521.870 kb on + strand, within Dsui_0516at 522.041 kb on + strand, within Dsui_0516at 522.041 kb on + strand, within Dsui_0516at 522.059 kb on + strand, within Dsui_0516at 522.185 kb on + strand, within Dsui_0516at 522.235 kb on - strandat 522.258 kb on + strandat 522.403 kb on + strandat 522.470 kb on - strandat 522.515 kb on + strandat 522.620 kb on - strand, within Dsui_0517at 522.682 kb on + strand, within Dsui_0517at 522.766 kb on - strand, within Dsui_0517at 522.783 kb on - strand, within Dsui_0517at 522.829 kb on + strand, within Dsui_0517at 522.839 kb on + strand, within Dsui_0517at 523.065 kb on - strand, within Dsui_0517at 523.075 kb on - strand, within Dsui_0517at 523.283 kb on - strand, within Dsui_0517at 523.622 kb on - strand, within Dsui_0517at 523.644 kb on + strand, within Dsui_0517at 523.742 kb on - strand, within Dsui_0517at 523.752 kb on + strand, within Dsui_0517at 523.812 kb on - strandat 523.824 kb on - strand, within Dsui_0517at 523.975 kb on + strandat 523.988 kb on - strandat 524.057 kb on - strandat 524.077 kb on - strandat 524.121 kb on + strandat 524.157 kb on + strand, within Dsui_0518at 524.311 kb on - strand, within Dsui_0518at 524.339 kb on + strand, within Dsui_0518at 524.347 kb on - strand, within Dsui_0518at 524.516 kb on - strand, within Dsui_0518at 524.549 kb on - strand, within Dsui_0518at 524.549 kb on - strand, within Dsui_0518at 524.642 kb on - strand, within Dsui_0518at 524.697 kb on + strand, within Dsui_0518at 524.781 kb on - strand, within Dsui_0518at 524.946 kb on + strand, within Dsui_0518

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Per-strain Table

Position Strand Gene LocusTag Fraction propionate (C)
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521,463 - Dsui_0516 0.51 -2.5
521,513 - Dsui_0516 0.54 -2.6
521,547 + Dsui_0516 0.56 +0.5
521,649 - Dsui_0516 0.61 -5.4
521,649 - Dsui_0516 0.61 -5.0
521,725 - Dsui_0516 0.65 -5.8
521,858 - Dsui_0516 0.71 -3.9
521,870 + Dsui_0516 0.72 -1.5
522,041 + Dsui_0516 0.80 -1.1
522,041 + Dsui_0516 0.80 -2.1
522,059 + Dsui_0516 0.81 -1.5
522,185 + Dsui_0516 0.88 +0.5
522,235 - -3.5
522,258 + -1.5
522,403 + -0.5
522,470 - -4.3
522,515 + +0.5
522,620 - Dsui_0517 0.11 -4.6
522,682 + Dsui_0517 0.15 -2.1
522,766 - Dsui_0517 0.21 -4.4
522,783 - Dsui_0517 0.22 -4.1
522,829 + Dsui_0517 0.25 +0.5
522,839 + Dsui_0517 0.25 +0.5
523,065 - Dsui_0517 0.40 -4.4
523,075 - Dsui_0517 0.41 -5.6
523,283 - Dsui_0517 0.54 -3.9
523,622 - Dsui_0517 0.76 -5.9
523,644 + Dsui_0517 0.78 +0.5
523,742 - Dsui_0517 0.84 -6.0
523,752 + Dsui_0517 0.85 +0.5
523,812 - -1.1
523,824 - Dsui_0517 0.90 -3.9
523,975 + -2.8
523,988 - -4.7
524,057 - -0.3
524,077 - -3.2
524,121 + +0.5
524,157 + Dsui_0518 0.12 -0.5
524,311 - Dsui_0518 0.27 -3.6
524,339 + Dsui_0518 0.30 -2.0
524,347 - Dsui_0518 0.31 -4.7
524,516 - Dsui_0518 0.47 -4.9
524,549 - Dsui_0518 0.50 -3.5
524,549 - Dsui_0518 0.50 -1.0
524,642 - Dsui_0518 0.59 -3.1
524,697 + Dsui_0518 0.65 -2.0
524,781 - Dsui_0518 0.73 -4.4
524,946 + Dsui_0518 0.89 -1.5

Or see this region's nucleotide sequence