Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0410 and Dsui_0411 are separated by 369 nucleotides Dsui_0411 and Dsui_0412 are separated by 47 nucleotides
Dsui_0410: Dsui_0410 - transcriptional regulator, at 410,630 to 411,265
_0410
Dsui_0411: Dsui_0411 - ABC-type dipeptide transport system, periplasmic component, at 411,635 to 413,245
_0411
Dsui_0412: Dsui_0412 - ABC-type dipeptide/oligopeptide/nickel transport system, permease component, at 413,293 to 414,246
_0412
Position (kb) 411
412
413
414 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 410.806 kb on + strand at 410.961 kb on - strand, within Dsui_0410 at 411.260 kb on + strand at 411.336 kb on - strand at 411.406 kb on - strand at 411.472 kb on - strand at 411.472 kb on - strand at 411.495 kb on + strand at 411.550 kb on - strand at 411.656 kb on - strand at 411.680 kb on + strand at 411.750 kb on + strand at 411.763 kb on - strand at 411.823 kb on - strand at 411.937 kb on + strand, within Dsui_0411 at 412.006 kb on + strand, within Dsui_0411 at 412.037 kb on + strand at 412.286 kb on - strand, within Dsui_0411 at 412.324 kb on + strand, within Dsui_0411 at 412.441 kb on + strand at 412.441 kb on + strand, within Dsui_0411 at 412.494 kb on - strand, within Dsui_0411 at 412.679 kb on - strand, within Dsui_0411 at 412.722 kb on + strand, within Dsui_0411 at 412.730 kb on - strand, within Dsui_0411 at 412.745 kb on - strand, within Dsui_0411 at 412.759 kb on + strand at 412.759 kb on + strand, within Dsui_0411 at 412.839 kb on + strand, within Dsui_0411 at 412.839 kb on + strand, within Dsui_0411 at 412.944 kb on - strand, within Dsui_0411 at 412.960 kb on - strand, within Dsui_0411 at 413.039 kb on - strand, within Dsui_0411 at 413.085 kb on - strand at 413.268 kb on - strand at 413.269 kb on - strand at 413.327 kb on - strand at 413.402 kb on - strand, within Dsui_0412 at 413.448 kb on - strand, within Dsui_0412 at 413.469 kb on + strand at 413.527 kb on - strand at 413.527 kb on - strand, within Dsui_0412 at 413.623 kb on + strand, within Dsui_0412 at 413.724 kb on + strand, within Dsui_0412 at 413.872 kb on + strand at 413.902 kb on - strand, within Dsui_0412 at 413.965 kb on - strand, within Dsui_0412 at 414.109 kb on - strand, within Dsui_0412 at 414.221 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 410,806 + +0.5 410,961 - Dsui_0410 0.52 +1.0 411,260 + -0.5 411,336 - +0.5 411,406 - -0.5 411,472 - -0.5 411,472 - +0.5 411,495 + +0.5 411,550 - -1.1 411,656 - +0.5 411,680 + -1.5 411,750 + +0.5 411,763 - -0.5 411,823 - +0.5 411,937 + Dsui_0411 0.19 -1.1 412,006 + Dsui_0411 0.23 -1.1 412,037 + +0.5 412,286 - Dsui_0411 0.40 +0.5 412,324 + Dsui_0411 0.43 -2.9 412,441 + +0.5 412,441 + Dsui_0411 0.50 +0.5 412,494 - Dsui_0411 0.53 +0.5 412,679 - Dsui_0411 0.65 -2.3 412,722 + Dsui_0411 0.67 -2.1 412,730 - Dsui_0411 0.68 +0.5 412,745 - Dsui_0411 0.69 -1.1 412,759 + +0.5 412,759 + Dsui_0411 0.70 -0.5 412,839 + Dsui_0411 0.75 +0.5 412,839 + Dsui_0411 0.75 -2.8 412,944 - Dsui_0411 0.81 +0.5 412,960 - Dsui_0411 0.82 -0.9 413,039 - Dsui_0411 0.87 -1.5 413,085 - +0.5 413,268 - -1.1 413,269 - +0.5 413,327 - -0.5 413,402 - Dsui_0412 0.11 -1.1 413,448 - Dsui_0412 0.16 +0.5 413,469 + -1.1 413,527 - +0.5 413,527 - Dsui_0412 0.25 -0.5 413,623 + Dsui_0412 0.35 -1.8 413,724 + Dsui_0412 0.45 -0.5 413,872 + -0.5 413,902 - Dsui_0412 0.64 -1.5 413,965 - Dsui_0412 0.70 +0.5 414,109 - Dsui_0412 0.86 -1.5 414,221 - -0.5
Or see this region's nucleotide sequence