Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03548

Experiment: PYE 30C survival rep1 12 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE 30C survival rep1 12 days
3,703,266	+		CCNA_03547	0.16	-2.4
3,703,274	-		CCNA_03547	0.17	-1.4
3,703,315	+		CCNA_03547	0.21	+0.8
3,703,328	-		CCNA_03547	0.22	-2.5
3,703,330	-		CCNA_03547	0.22	+0.0
3,703,361	+		CCNA_03547	0.25	+0.6
3,703,364	-		CCNA_03547	0.26	+0.4
3,703,371	-		CCNA_03547	0.26	+0.4
3,703,396	+		CCNA_03547	0.29	-0.4
3,703,489	+		CCNA_03547	0.37	-0.6
3,703,492	-		CCNA_03547	0.38	-0.1
3,703,509	+		CCNA_03547	0.39	-1.1
3,703,511	+		CCNA_03547	0.39	-1.6
3,703,517	-		CCNA_03547	0.40	+0.0
3,703,517	-		CCNA_03547	0.40	+0.0
3,703,517	-		CCNA_03547	0.40	+0.8
3,703,528	+		CCNA_03547	0.41	-1.0
3,703,530	+		CCNA_03547	0.41	-1.5
3,703,567	+		CCNA_03547	0.45	+3.0
3,703,574	+		CCNA_03547	0.45	-0.6
3,703,575	-		CCNA_03547	0.46	-0.2
3,703,690	-		CCNA_03547	0.56	-1.7
3,703,691	+		CCNA_03547	0.57	-1.0
3,703,696	+		CCNA_03547	0.57	-1.3
3,703,699	-		CCNA_03547	0.57	-0.4
3,703,699	-		CCNA_03547	0.57	-0.8
3,703,699	-		CCNA_03547	0.57	+0.8
3,703,720	+		CCNA_03547	0.59	-0.9
3,703,756	+		CCNA_03547	0.63	-1.6
3,703,756	+		CCNA_03547	0.63	-0.3
3,703,756	+				+0.8
3,703,763	+		CCNA_03547	0.63	+2.7
3,703,764	-		CCNA_03547	0.63	+0.8
3,703,782	+		CCNA_03547	0.65	+0.6
3,703,790	-		CCNA_03547	0.66	-2.2
3,703,848	+		CCNA_03547	0.71	+0.5
3,703,904	+		CCNA_03547	0.77	+0.8
3,703,927	-		CCNA_03547	0.79	-0.8
3,703,935	+		CCNA_03547	0.80	-2.4
3,703,940	+		CCNA_03547	0.80	+1.4
3,703,940	+		CCNA_03547	0.80	+2.1
3,703,940	+		CCNA_03547	0.80	-0.4
3,703,948	-		CCNA_03547	0.81	-0.4
3,703,968	+		CCNA_03547	0.83	-1.1
3,703,986	+		CCNA_03547	0.84	-0.7
3,704,004	-		CCNA_03547	0.86	+2.4
3,704,004	-		CCNA_03547	0.86	-1.9
3,704,056	-				+0.0
3,704,082	+				-0.3
3,704,086	-				+0.8
3,704,088	-				-1.1
3,704,110	+				-3.4
3,704,199	+				-1.6
3,704,199	+				-1.4
3,704,199	+				-1.3
3,704,199	+				-2.5
3,704,199	+				-0.4
3,704,199	+				-1.5
3,704,199	+				+0.6
3,704,202	-				-1.3
3,704,207	-				+0.0
3,704,207	-				-2.0
3,704,209	+				+0.8
3,704,209	+				+0.4
3,704,214	+				-0.5
3,704,319	+				+2.4
3,704,320	+				+0.8
3,704,362	+				+2.4
3,704,370	-				+1.4
3,704,398	+				+1.4
3,704,398	+				-0.6
3,704,398	+				+0.8
3,704,398	+				+0.0
3,704,400	+				+2.4
3,704,483	+		CCNA_03548	0.16	+1.4
3,704,491	-		CCNA_03548	0.16	+2.4
3,704,535	-		CCNA_03548	0.19	+2.4
3,704,567	+		CCNA_03548	0.22	+1.4
3,704,567	+		CCNA_03548	0.22	+1.4
3,704,575	-		CCNA_03548	0.22	+2.4
3,704,666	-		CCNA_03548	0.29	+0.4
3,704,669	-		CCNA_03548	0.29	-2.3
3,704,944	+		CCNA_03548	0.49	+0.8
3,704,961	+		CCNA_03548	0.50	+0.0
3,705,013	+		CCNA_03548	0.54	+1.4
3,705,023	+		CCNA_03548	0.54	-1.8
3,705,023	+		CCNA_03548	0.54	+0.0
3,705,023	+		CCNA_03548	0.54	-1.5
3,705,070	-		CCNA_03548	0.58	+2.4
3,705,169	+		CCNA_03548	0.65	+2.4
3,705,199	+		CCNA_03548	0.67	+0.4
3,705,207	-		CCNA_03548	0.68	+2.4
3,705,221	+		CCNA_03548	0.69	+1.4
3,705,290	+		CCNA_03548	0.74	-0.4
3,705,298	+		CCNA_03548	0.74	+2.4
3,705,313	+		CCNA_03548	0.75	+0.4
3,705,331	+		CCNA_03548	0.77	+1.4
3,705,365	+		CCNA_03548	0.79	-0.8
3,705,367	+		CCNA_03548	0.79	-1.2
3,705,407	+		CCNA_03548	0.82	-0.2
3,705,430	+		CCNA_03548	0.84	+0.4
3,705,436	+		CCNA_03548	0.84	-0.8
3,705,484	+		CCNA_03548	0.88	-1.9
3,705,485	-		CCNA_03548	0.88	+1.4
3,705,532	+				-1.4
3,705,534	+				-2.0
3,705,648	+				+0.5
3,705,656	-				+0.4
3,705,687	+				+0.7
3,705,695	-				-1.5
3,705,706	+				+0.8
3,705,748	-				-0.2
3,705,771	-				-1.6
3,705,773	+				-0.1
3,705,773	+				-0.2
3,705,773	+				+0.6
3,705,773	+				-1.4
3,705,773	+				-2.0
3,705,781	-				-0.7
3,705,806	+				-1.0
3,705,808	+				+0.1
3,705,814	-				-0.1
3,705,816	-				-0.4
3,705,816	-				+0.3
3,705,816	-				+0.5
3,705,818	+				-3.0
3,705,833	+				-1.1
3,705,842	+				-2.5
3,705,852	+				+1.0
3,705,860	-				+0.0
3,705,861	-				-0.3
3,705,872	+				-0.4
3,705,944	+				-0.5
3,705,962	-				-1.6
3,706,029	-		CCNA_03549	0.12	-0.2
3,706,092	+		CCNA_03549	0.15	-1.0
3,706,101	-		CCNA_03549	0.15	+1.4
3,706,101	-		CCNA_03549	0.15	-0.6
3,706,101	-		CCNA_03549	0.15	-2.3
3,706,101	-		CCNA_03549	0.15	-1.3
3,706,101	-		CCNA_03549	0.15	+0.8
3,706,132	+		CCNA_03549	0.16	+0.4
3,706,132	+		CCNA_03549	0.16	+0.4
3,706,132	+		CCNA_03549	0.16	-0.4
3,706,140	-		CCNA_03549	0.17	-0.6
3,706,140	-		CCNA_03549	0.17	-1.6
3,706,147	-		CCNA_03549	0.17	-0.4
3,706,153	-		CCNA_03549	0.17	+0.9
3,706,153	-		CCNA_03549	0.17	-0.3
3,706,162	+		CCNA_03549	0.17	+0.3
3,706,162	+		CCNA_03549	0.17	-0.4
3,706,170	-		CCNA_03549	0.18	+1.1
3,706,170	-		CCNA_03549	0.18	-0.5
3,706,170	-		CCNA_03549	0.18	-0.6
3,706,184	+		CCNA_03549	0.18	+1.4
3,706,191	-		CCNA_03549	0.19	-0.5
3,706,211	+		CCNA_03549	0.20	-2.2
3,706,211	+		CCNA_03549	0.20	+0.0
3,706,238	+		CCNA_03549	0.21	-2.4
3,706,238	+		CCNA_03549	0.21	-0.6
3,706,238	+		CCNA_03549	0.21	+0.5
3,706,238	+		CCNA_03549	0.21	-0.4
3,706,238	+		CCNA_03549	0.21	-1.8
3,706,238	+		CCNA_03549	0.21	+1.6
3,706,238	+		CCNA_03549	0.21	-2.0
3,706,238	+		CCNA_03549	0.21	+0.4
3,706,238	+				+0.4
3,706,238	+		CCNA_03549	0.21	+0.3
3,706,238	+		CCNA_03549	0.21	-0.2
3,706,243	+		CCNA_03549	0.21	-0.1
3,706,243	+		CCNA_03549	0.21	+1.2
3,706,243	+		CCNA_03549	0.21	-1.0
3,706,246	-		CCNA_03549	0.21	+1.7
3,706,246	-		CCNA_03549	0.21	+1.4
3,706,246	-		CCNA_03549	0.21	+0.4
3,706,246	-		CCNA_03549	0.21	-1.2
3,706,246	-		CCNA_03549	0.21	+0.0
3,706,246	-		CCNA_03549	0.21	-1.2
3,706,246	-		CCNA_03549	0.21	-1.1
3,706,246	-		CCNA_03549	0.21	+2.4
3,706,246	-		CCNA_03549	0.21	-0.6
3,706,246	-		CCNA_03549	0.21	-1.1
3,706,246	-		CCNA_03549	0.21	+0.4
3,706,246	-		CCNA_03549	0.21	+1.7
3,706,273	+		CCNA_03549	0.22	-1.2
3,706,273	+		CCNA_03549	0.22	-0.6
3,706,290	-		CCNA_03549	0.23	+0.4
3,706,357	-		CCNA_03549	0.26	-0.1
3,706,378	-		CCNA_03549	0.26	+2.0
3,706,403	-		CCNA_03549	0.28	+0.9
3,706,418	+		CCNA_03549	0.28	-1.7
3,706,481	+		CCNA_03549	0.31	+2.4
3,706,502	+		CCNA_03549	0.32	+0.0
3,706,528	+		CCNA_03549	0.33	+1.4
3,706,528	+		CCNA_03549	0.33	+0.7
3,706,536	-		CCNA_03549	0.33	+1.4
3,706,571	-		CCNA_03549	0.34	-1.1
3,706,574	+		CCNA_03549	0.35	-0.6
3,706,574	+		CCNA_03549	0.35	-1.2
3,706,616	-		CCNA_03549	0.36	-0.4
3,706,653	+		CCNA_03549	0.38	-0.3