Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03226

Experiment: PYE 30C survival rep1 12 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE 30C survival rep1 12 days
3,387,369	-		CCNA_03225	0.23	-0.3
3,387,383	-		CCNA_03225	0.24	-0.1
3,387,433	+		CCNA_03225	0.28	-0.8
3,387,502	+		CCNA_03225	0.33	-0.4
3,387,502	+		CCNA_03225	0.33	-0.4
3,387,502	+		CCNA_03225	0.33	-1.8
3,387,510	-		CCNA_03225	0.34	+2.4
3,387,510	-		CCNA_03225	0.34	+0.6
3,387,516	-		CCNA_03225	0.34	-0.8
3,387,516	-		CCNA_03225	0.34	+1.4
3,387,521	-		CCNA_03225	0.34	-1.6
3,387,521	-		CCNA_03225	0.34	-0.4
3,387,521	-		CCNA_03225	0.34	+0.8
3,387,568	-		CCNA_03225	0.38	-1.8
3,387,601	-		CCNA_03225	0.41	+0.4
3,387,689	-		CCNA_03225	0.47	+1.6
3,387,691	+		CCNA_03225	0.48	-1.6
3,387,694	-		CCNA_03225	0.48	+1.7
3,387,706	+		CCNA_03225	0.49	-0.9
3,387,756	-		CCNA_03225	0.53	+1.4
3,387,782	+		CCNA_03225	0.55	-0.0
3,387,841	-		CCNA_03225	0.59	+0.4
3,387,862	+		CCNA_03225	0.61	-1.2
3,387,947	-		CCNA_03225	0.67	-1.0
3,387,947	-		CCNA_03225	0.67	-0.6
3,388,010	-		CCNA_03225	0.72	+0.0
3,388,010	-		CCNA_03225	0.72	-0.7
3,388,010	-		CCNA_03225	0.72	-1.7
3,388,025	-		CCNA_03225	0.73	-0.4
3,388,033	+		CCNA_03225	0.74	-2.1
3,388,033	+		CCNA_03225	0.74	-1.4
3,388,049	-		CCNA_03225	0.75	+0.6
3,388,051	+		CCNA_03225	0.75	-0.5
3,388,084	-		CCNA_03225	0.78	-0.4
3,388,088	+		CCNA_03225	0.78	+1.4
3,388,088	+		CCNA_03225	0.78	+0.4
3,388,096	-		CCNA_03225	0.79	-0.9
3,388,096	-		CCNA_03225	0.79	-0.0
3,388,110	-		CCNA_03225	0.80	+0.9
3,388,137	+		CCNA_03225	0.82	+0.5
3,388,142	+		CCNA_03225	0.82	+1.1
3,388,145	-		CCNA_03225	0.83	-1.3
3,388,150	-		CCNA_03225	0.83	-0.5
3,388,150	-		CCNA_03225	0.83	+1.4
3,388,152	+		CCNA_03225	0.83	-1.8
3,388,160	-		CCNA_03225	0.84	-0.8
3,388,161	-		CCNA_03225	0.84	+1.2
3,388,169	+		CCNA_03225	0.84	+0.7
3,388,200	-		CCNA_03225	0.87	+0.2
3,388,204	-		CCNA_03225	0.87	-0.9
3,388,239	+		CCNA_03225	0.90	-0.9
3,388,280	+				-1.3
3,388,297	+				+1.8
3,388,305	-				-1.1
3,388,310	-				+1.2
3,388,372	+				-1.2
3,388,420	+				+0.1
3,388,437	-				+0.1
3,388,463	+				-0.9
3,388,471	-				+0.7
3,388,473	+				+0.2
3,388,473	+				-0.3
3,388,492	-				+0.4
3,388,502	+		CCNA_03226	0.10	-2.0
3,388,502	+		CCNA_03226	0.10	+0.8
3,388,510	-		CCNA_03226	0.11	-1.2
3,388,514	+		CCNA_03226	0.11	+1.4
3,388,524	+		CCNA_03226	0.12	-0.8
3,388,528	+		CCNA_03226	0.12	+0.1
3,388,528	-		CCNA_03226	0.12	-0.6
3,388,537	-		CCNA_03226	0.13	+1.0
3,388,560	+		CCNA_03226	0.15	-0.8
3,388,574	+		CCNA_03226	0.16	-0.9
3,388,574	+		CCNA_03226	0.16	-0.8
3,388,582	+		CCNA_03226	0.16	+1.3
3,388,593	+		CCNA_03226	0.17	-0.7
3,388,604	+		CCNA_03226	0.18	-0.8
3,388,634	-		CCNA_03226	0.20	-1.5
3,388,634	-		CCNA_03226	0.20	-1.7
3,388,698	+		CCNA_03226	0.25	+0.9
3,388,698	+		CCNA_03226	0.25	-1.9
3,388,706	-		CCNA_03226	0.26	+0.4
3,388,723	-		CCNA_03226	0.27	+1.2
3,388,895	+		CCNA_03226	0.40	+2.0
3,388,906	-		CCNA_03226	0.41	+0.3
3,388,947	+		CCNA_03226	0.44	-0.0
3,388,947	+		CCNA_03226	0.44	-0.4
3,388,947	+		CCNA_03226	0.44	+1.4
3,388,947	+		CCNA_03226	0.44	-0.3
3,388,947	+		CCNA_03226	0.44	-0.6
3,388,947	+		CCNA_03226	0.44	-0.3
3,388,952	+		CCNA_03226	0.44	+0.4
3,388,955	-		CCNA_03226	0.45	-0.3
3,388,955	-		CCNA_03226	0.45	+0.5
3,388,955	-		CCNA_03226	0.45	+0.4
3,388,955	-		CCNA_03226	0.45	+1.7
3,388,960	-		CCNA_03226	0.45	-0.4
3,388,976	+		CCNA_03226	0.46	-1.8
3,388,976	+		CCNA_03226	0.46	+1.6
3,388,976	+		CCNA_03226	0.46	+0.7
3,388,979	-		CCNA_03226	0.46	-0.7
3,388,981	+		CCNA_03226	0.47	+0.9
3,388,981	+		CCNA_03226	0.47	-1.2
3,388,984	-		CCNA_03226	0.47	+0.8
3,388,989	-		CCNA_03226	0.47	-0.5
3,389,074	-		CCNA_03226	0.54	+0.8
3,389,183	-		CCNA_03226	0.62	-1.1
3,389,203	-		CCNA_03226	0.63	-2.0
3,389,237	-		CCNA_03226	0.66	-1.1
3,389,265	+		CCNA_03226	0.68	+2.4
3,389,265	+		CCNA_03226	0.68	+2.4
3,389,265	+		CCNA_03226	0.68	+1.4
3,389,265	+		CCNA_03226	0.68	+0.8
3,389,272	+		CCNA_03226	0.69	+1.4
3,389,273	-		CCNA_03226	0.69	-2.6
3,389,273	-		CCNA_03226	0.69	-0.3
3,389,273	-		CCNA_03226	0.69	-0.3
3,389,273	-		CCNA_03226	0.69	-1.6
3,389,273	-		CCNA_03226	0.69	+0.3
3,389,273	-		CCNA_03226	0.69	+0.9
3,389,273	-		CCNA_03226	0.69	-0.4
3,389,273	-		CCNA_03226	0.69	+0.7
3,389,273	-		CCNA_03226	0.69	-1.2
3,389,275	+		CCNA_03226	0.69	+1.2
3,389,285	+		CCNA_03226	0.70	+1.6
3,389,293	-		CCNA_03226	0.70	-2.4
3,389,301	+		CCNA_03226	0.71	-1.3
3,389,365	-		CCNA_03226	0.76	+1.8
3,389,387	+		CCNA_03226	0.77	+3.2
3,389,402	+		CCNA_03226	0.79	+0.4
3,389,402	+		CCNA_03226	0.79	+0.1
3,389,405	-		CCNA_03226	0.79	-2.0
3,389,410	-		CCNA_03226	0.79	+0.4
3,389,414	+		CCNA_03226	0.79	+0.3
3,389,455	+		CCNA_03226	0.83	+2.4
3,389,463	-		CCNA_03226	0.83	+0.5
3,389,495	+		CCNA_03226	0.86	-0.8
3,389,496	+		CCNA_03226	0.86	+0.3
3,389,497	-		CCNA_03226	0.86	-1.3
3,389,533	-		CCNA_03226	0.89	-1.8
3,389,534	-		CCNA_03226	0.89	-0.2
3,389,556	-				+0.2
3,389,571	-				-1.1
3,389,579	-				+0.6
3,389,615	+				-2.1
3,389,615	+				-1.4
3,389,615	+				+0.5
3,389,615	+				-0.8
3,389,623	-				+0.4
3,389,623	-				+2.6
3,389,623	-				+2.0
3,389,623	-				+1.2
3,389,623	-				-0.2
3,389,623	-				-0.8
3,389,630	+				+0.8
3,389,630	+				-0.3
3,389,630	+				+1.9
3,389,638	-				+0.5
3,389,646	+				-2.5
3,389,647	-				-0.4
3,389,654	-				-2.4
3,389,654	-				-3.4
3,389,655	-				+1.1
3,389,661	+				-1.3
3,389,676	-				-2.9
3,389,676	-				-3.3
3,389,697	+				+0.1
3,389,697	+				-0.4
3,389,736	+				+0.1
3,389,759	-				-1.8
3,389,774	-				+0.4
3,389,785	-				+0.6
3,389,787	+				+0.8
3,389,787	+				-0.2
3,389,787	+				+1.2
3,389,787	+				-0.2
3,389,787	+				+0.2
3,389,787	+				+1.4
3,389,787	+				+1.4
3,389,787	+				+0.8
3,389,793	-				-0.8
3,389,795	-				+0.1
3,389,795	-				+0.1
3,389,795	-				+0.1
3,389,795	-				-1.5
3,389,795	-				+0.0
3,389,795	-				+0.2
3,389,795	-				-0.1
3,389,795	-				-0.4
3,389,795	-				-0.5
3,389,795	-				-0.0
3,389,795	-				-0.5
3,389,795	-				-0.1
3,389,795	-				-0.0
3,389,795	-				-0.3
3,389,795	-				-0.6
3,389,795	-				-0.4
3,389,795	-				+0.4
3,389,795	-				+0.2
3,389,795	-				+0.3
3,389,795	-				-0.6
3,389,834	+				+1.5
3,389,834	+				-0.8
3,389,834	+				-1.6
3,389,841	-				-1.3
3,389,841	-				+0.7
3,389,842	-				+1.4
3,389,890	-				-0.5
3,389,891	+				-0.2
3,389,891	+				+0.4
3,389,904	-				-0.2
3,389,906	+				-0.8
3,389,924	+				-0.6
3,389,936	-				+0.8
3,389,974	-		CCNA_03227	0.10	+0.9
3,389,983	-		CCNA_03227	0.10	+0.1
3,390,008	-		CCNA_03227	0.11	-0.5
3,390,010	+		CCNA_03227	0.12	-1.2
3,390,018	-		CCNA_03227	0.12	+0.2
3,390,035	+		CCNA_03227	0.13	+0.8
3,390,043	-		CCNA_03227	0.13	+0.6
3,390,043	-		CCNA_03227	0.13	+0.2
3,390,071	-		CCNA_03227	0.14	+0.5
3,390,078	-		CCNA_03227	0.14	+1.5
3,390,129	+		CCNA_03227	0.16	+0.1
3,390,144	-		CCNA_03227	0.17	+1.2
3,390,160	+		CCNA_03227	0.18	+1.4
3,390,193	-		CCNA_03227	0.19	+1.0
3,390,210	+		CCNA_03227	0.20	+0.8
3,390,233	+		CCNA_03227	0.21	+0.6
3,390,241	-		CCNA_03227	0.21	+0.5
3,390,270	-		CCNA_03227	0.22	+0.5
3,390,276	+		CCNA_03227	0.23	-0.2
3,390,276	+		CCNA_03227	0.23	+2.4
3,390,276	+		CCNA_03227	0.23	-0.4
3,390,276	+		CCNA_03227	0.23	-1.4
3,390,276	+		CCNA_03227	0.23	-1.1
3,390,276	+		CCNA_03227	0.23	+1.1
3,390,284	-		CCNA_03227	0.23	+0.3
3,390,284	-		CCNA_03227	0.23	+1.2
3,390,284	-		CCNA_03227	0.23	-0.6
3,390,284	-		CCNA_03227	0.23	-0.1
3,390,301	+		CCNA_03227	0.24	+1.5
3,390,324	+		CCNA_03227	0.25	+1.9
3,390,358	+		CCNA_03227	0.26	-0.9
3,390,359	-		CCNA_03227	0.26	-0.2
3,390,368	-		CCNA_03227	0.26	-0.7
3,390,368	-		CCNA_03227	0.26	+1.1
3,390,368	-		CCNA_03227	0.26	+0.8
3,390,368	-		CCNA_03227	0.26	+0.3
3,390,400	-		CCNA_03227	0.28	+0.4
3,390,416	-		CCNA_03227	0.28	+0.9
3,390,462	+		CCNA_03227	0.30	+1.4
3,390,462	+		CCNA_03227	0.30	+0.1
3,390,462	+		CCNA_03227	0.30	+0.8
3,390,470	-		CCNA_03227	0.31	-0.0
3,390,470	-		CCNA_03227	0.31	+0.8
3,390,495	+		CCNA_03227	0.32	-1.7
3,390,503	-		CCNA_03227	0.32	-0.1
3,390,503	-		CCNA_03227	0.32	-0.8
3,390,503	-		CCNA_03227	0.32	+0.3
3,390,504	-		CCNA_03227	0.32	+2.4
3,390,510	+		CCNA_03227	0.32	+0.4
3,390,510	+		CCNA_03227	0.32	+0.4
3,390,518	-		CCNA_03227	0.33	-0.1
3,390,520	+		CCNA_03227	0.33	+1.9
3,390,544	-		CCNA_03227	0.34	-1.7
3,390,553	+		CCNA_03227	0.34	+2.4
3,390,590	-		CCNA_03227	0.36	-2.0
3,390,600	-		CCNA_03227	0.36	-0.3
3,390,602	+		CCNA_03227	0.36	+0.1
3,390,602	+		CCNA_03227	0.36	+1.8
3,390,604	-		CCNA_03227	0.36	+0.8
3,390,616	-		CCNA_03227	0.37	-0.4
3,390,638	-		CCNA_03227	0.38	+1.0
3,390,654	+		CCNA_03227	0.38	-0.8
3,390,668	-		CCNA_03227	0.39	-1.3