Experiment: L-Histidine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS21890 and BWI76_RS21895 are separated by 9 nucleotides BWI76_RS21895 and BWI76_RS21900 are separated by 24 nucleotides BWI76_RS21900 and BWI76_RS21905 are separated by 0 nucleotides BWI76_RS21905 and BWI76_RS21910 are separated by 5 nucleotides
BWI76_RS21890: BWI76_RS21890 - oxidoreductase, at 4,574,091 to 4,575,167
_RS21890
BWI76_RS21895: BWI76_RS21895 - amino acid ABC transport system periplasmic amino acid-binding component, at 4,575,177 to 4,575,980
_RS21895
BWI76_RS21900: BWI76_RS21900 - amino acid ABC transporter permease/ATP-binding protein, at 4,576,005 to 4,577,525
_RS21900
BWI76_RS21905: BWI76_RS21905 - class II aldolase, at 4,577,526 to 4,578,254
_RS21905
BWI76_RS21910: BWI76_RS21910 - glyoxylate/hydroxypyruvate reductase A, at 4,578,260 to 4,579,192
_RS21910
Position (kb) 4576
4577
4578 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 4575.036 kb on + strand, within BWI76_RS21890 at 4575.044 kb on - strand, within BWI76_RS21890 at 4575.068 kb on + strand at 4575.221 kb on - strand at 4575.221 kb on - strand at 4575.272 kb on + strand, within BWI76_RS21895 at 4575.357 kb on + strand, within BWI76_RS21895 at 4575.520 kb on + strand, within BWI76_RS21895 at 4575.520 kb on + strand, within BWI76_RS21895 at 4575.526 kb on - strand, within BWI76_RS21895 at 4575.527 kb on - strand, within BWI76_RS21895 at 4575.573 kb on - strand, within BWI76_RS21895 at 4575.606 kb on - strand, within BWI76_RS21895 at 4575.657 kb on + strand, within BWI76_RS21895 at 4575.818 kb on - strand, within BWI76_RS21895 at 4575.885 kb on - strand, within BWI76_RS21895 at 4575.924 kb on - strand at 4575.925 kb on - strand at 4576.142 kb on + strand at 4576.143 kb on - strand at 4576.144 kb on + strand at 4576.159 kb on + strand, within BWI76_RS21900 at 4576.250 kb on + strand, within BWI76_RS21900 at 4576.261 kb on + strand, within BWI76_RS21900 at 4576.327 kb on + strand, within BWI76_RS21900 at 4576.400 kb on - strand, within BWI76_RS21900 at 4576.400 kb on - strand, within BWI76_RS21900 at 4576.400 kb on - strand, within BWI76_RS21900 at 4576.550 kb on + strand, within BWI76_RS21900 at 4576.584 kb on - strand, within BWI76_RS21900 at 4576.648 kb on - strand, within BWI76_RS21900 at 4576.648 kb on - strand, within BWI76_RS21900 at 4576.690 kb on + strand, within BWI76_RS21900 at 4576.905 kb on + strand, within BWI76_RS21900 at 4577.012 kb on - strand, within BWI76_RS21900 at 4577.076 kb on + strand, within BWI76_RS21900 at 4577.115 kb on - strand, within BWI76_RS21900 at 4577.449 kb on - strand at 4577.723 kb on + strand, within BWI76_RS21905 at 4577.733 kb on + strand, within BWI76_RS21905 at 4577.741 kb on - strand, within BWI76_RS21905 at 4578.165 kb on - strand, within BWI76_RS21905 at 4578.167 kb on + strand, within BWI76_RS21905 at 4578.230 kb on + strand at 4578.296 kb on + strand at 4578.304 kb on - strand at 4578.342 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (N) remove 4,575,036 + BWI76_RS21890 0.88 +0.8 4,575,044 - BWI76_RS21890 0.88 -1.4 4,575,068 + +1.0 4,575,221 - -1.6 4,575,221 - -1.8 4,575,272 + BWI76_RS21895 0.12 -1.2 4,575,357 + BWI76_RS21895 0.22 +0.1 4,575,520 + BWI76_RS21895 0.43 +1.4 4,575,520 + BWI76_RS21895 0.43 -0.2 4,575,526 - BWI76_RS21895 0.43 -1.8 4,575,527 - BWI76_RS21895 0.44 -1.4 4,575,573 - BWI76_RS21895 0.49 -0.9 4,575,606 - BWI76_RS21895 0.53 -3.0 4,575,657 + BWI76_RS21895 0.60 -0.7 4,575,818 - BWI76_RS21895 0.80 -2.1 4,575,885 - BWI76_RS21895 0.88 -3.5 4,575,924 - -2.5 4,575,925 - -3.2 4,576,142 + -2.9 4,576,143 - -1.4 4,576,144 + -2.2 4,576,159 + BWI76_RS21900 0.10 -0.5 4,576,250 + BWI76_RS21900 0.16 -1.6 4,576,261 + BWI76_RS21900 0.17 -1.6 4,576,327 + BWI76_RS21900 0.21 -1.8 4,576,400 - BWI76_RS21900 0.26 -1.9 4,576,400 - BWI76_RS21900 0.26 -2.4 4,576,400 - BWI76_RS21900 0.26 -3.0 4,576,550 + BWI76_RS21900 0.36 -1.3 4,576,584 - BWI76_RS21900 0.38 -3.7 4,576,648 - BWI76_RS21900 0.42 -0.3 4,576,648 - BWI76_RS21900 0.42 -1.7 4,576,690 + BWI76_RS21900 0.45 -1.1 4,576,905 + BWI76_RS21900 0.59 +0.4 4,577,012 - BWI76_RS21900 0.66 -2.8 4,577,076 + BWI76_RS21900 0.70 +0.5 4,577,115 - BWI76_RS21900 0.73 -1.1 4,577,449 - -0.5 4,577,723 + BWI76_RS21905 0.27 -1.8 4,577,733 + BWI76_RS21905 0.28 +0.6 4,577,741 - BWI76_RS21905 0.29 -1.9 4,578,165 - BWI76_RS21905 0.88 -3.7 4,578,167 + BWI76_RS21905 0.88 -2.3 4,578,230 + -0.8 4,578,296 + -2.9 4,578,304 - -2.9 4,578,342 - -2.5
Or see this region's nucleotide sequence