Experiment: L-Histidine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS17505 and BWI76_RS17510 are separated by 63 nucleotides BWI76_RS17510 and BWI76_RS17515 are separated by 50 nucleotides
BWI76_RS17505: BWI76_RS17505 - PLP-dependent lyase/thiolase, at 3,629,898 to 3,631,097
_RS17505
BWI76_RS17510: BWI76_RS17510 - selenium metabolism hydrolase, at 3,631,161 to 3,632,372
_RS17510
BWI76_RS17515: BWI76_RS17515 - dihydropyrimidinase, at 3,632,423 to 3,633,829
_RS17515
Position (kb)
3631
3632
3633 Strain fitness (log2 ratio)
-1
0
1 at 3630.207 kb on - strand, within BWI76_RS17505 at 3630.556 kb on - strand, within BWI76_RS17505 at 3630.686 kb on + strand, within BWI76_RS17505 at 3630.694 kb on + strand, within BWI76_RS17505 at 3630.739 kb on - strand, within BWI76_RS17505 at 3630.775 kb on - strand, within BWI76_RS17505 at 3630.894 kb on - strand, within BWI76_RS17505 at 3630.894 kb on - strand, within BWI76_RS17505 at 3631.040 kb on - strand at 3631.042 kb on + strand at 3631.146 kb on - strand at 3631.498 kb on + strand, within BWI76_RS17510 at 3631.631 kb on + strand, within BWI76_RS17510 at 3632.060 kb on + strand, within BWI76_RS17510 at 3632.070 kb on + strand, within BWI76_RS17510 at 3632.070 kb on + strand, within BWI76_RS17510 at 3632.078 kb on - strand, within BWI76_RS17510 at 3632.182 kb on + strand at 3632.354 kb on - strand at 3632.799 kb on + strand, within BWI76_RS17515 at 3632.876 kb on - strand, within BWI76_RS17515 at 3633.047 kb on - strand, within BWI76_RS17515 at 3633.173 kb on - strand at 3633.284 kb on + strand, within BWI76_RS17515 at 3633.354 kb on + strand, within BWI76_RS17515
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (N) remove 3,630,207 - BWI76_RS17505 0.26 -0.2 3,630,556 - BWI76_RS17505 0.55 -0.3 3,630,686 + BWI76_RS17505 0.66 -0.3 3,630,694 + BWI76_RS17505 0.66 +0.2 3,630,739 - BWI76_RS17505 0.70 +0.6 3,630,775 - BWI76_RS17505 0.73 +0.6 3,630,894 - BWI76_RS17505 0.83 -0.1 3,630,894 - BWI76_RS17505 0.83 -0.7 3,631,040 - +0.1 3,631,042 + -0.5 3,631,146 - +0.4 3,631,498 + BWI76_RS17510 0.28 -0.3 3,631,631 + BWI76_RS17510 0.39 +1.2 3,632,060 + BWI76_RS17510 0.74 -0.3 3,632,070 + BWI76_RS17510 0.75 +0.7 3,632,070 + BWI76_RS17510 0.75 -0.0 3,632,078 - BWI76_RS17510 0.76 +0.8 3,632,182 + -0.1 3,632,354 - -0.2 3,632,799 + BWI76_RS17515 0.27 -0.5 3,632,876 - BWI76_RS17515 0.32 -0.3 3,633,047 - BWI76_RS17515 0.44 -1.4 3,633,173 - +0.9 3,633,284 + BWI76_RS17515 0.61 -0.3 3,633,354 + BWI76_RS17515 0.66 +0.5
Or see this region's nucleotide sequence