Experiment: L-Histidine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS11035 and BWI76_RS11040 are separated by 35 nucleotides BWI76_RS11040 and BWI76_RS11045 are separated by 307 nucleotides BWI76_RS11045 and BWI76_RS11050 are separated by 189 nucleotides
BWI76_RS11035: BWI76_RS11035 - putative LysR-family transcriptional regulator, at 2,327,538 to 2,328,473
_RS11035
BWI76_RS11040: BWI76_RS11040 - ribonuclease E, at 2,328,509 to 2,331,757
_RS11040
BWI76_RS11045: BWI76_RS11045 - hypothetical protein, at 2,332,065 to 2,332,223
_RS11045
BWI76_RS11050: BWI76_RS11050 - 23S rRNA pseudouridine(955/2504/2580) synthase, at 2,332,413 to 2,333,408
_RS11050
Position (kb)
2328
2329
2330
2331
2332 Strain fitness (log2 ratio)
-2
-1
0
1 at 2327.590 kb on + strand at 2327.975 kb on - strand, within BWI76_RS11035 at 2328.121 kb on + strand, within BWI76_RS11035 at 2328.790 kb on + strand at 2329.150 kb on - strand, within BWI76_RS11040 at 2329.743 kb on - strand, within BWI76_RS11040 at 2332.246 kb on - strand at 2332.334 kb on - strand at 2332.375 kb on + strand at 2332.420 kb on + strand at 2332.541 kb on + strand, within BWI76_RS11050 at 2332.547 kb on - strand, within BWI76_RS11050 at 2332.547 kb on - strand, within BWI76_RS11050 at 2332.549 kb on - strand, within BWI76_RS11050 at 2332.549 kb on - strand, within BWI76_RS11050 at 2332.585 kb on + strand, within BWI76_RS11050 at 2332.699 kb on + strand, within BWI76_RS11050
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (N) remove 2,327,590 + +0.3 2,327,975 - BWI76_RS11035 0.47 +0.4 2,328,121 + BWI76_RS11035 0.62 +0.3 2,328,790 + -0.2 2,329,150 - BWI76_RS11040 0.20 -1.1 2,329,743 - BWI76_RS11040 0.38 -0.8 2,332,246 - -0.6 2,332,334 - +0.3 2,332,375 + +0.4 2,332,420 + -0.8 2,332,541 + BWI76_RS11050 0.13 -0.5 2,332,547 - BWI76_RS11050 0.13 -1.3 2,332,547 - BWI76_RS11050 0.13 +0.7 2,332,549 - BWI76_RS11050 0.14 -0.8 2,332,549 - BWI76_RS11050 0.14 -0.2 2,332,585 + BWI76_RS11050 0.17 -1.0 2,332,699 + BWI76_RS11050 0.29 -2.5
Or see this region's nucleotide sequence