Experiment: L-Histidine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS09870 and BWI76_RS09875 are separated by 187 nucleotides BWI76_RS09875 and BWI76_RS09880 are separated by 591 nucleotides
BWI76_RS09870: BWI76_RS09870 - aromatic amino acid aminotransferase, at 2,072,816 to 2,074,006
_RS09870
BWI76_RS09875: BWI76_RS09875 - phosphoporin PhoE, at 2,074,194 to 2,075,273
_RS09875
BWI76_RS09880: BWI76_RS09880 - asparagine--tRNA ligase, at 2,075,865 to 2,077,265
_RS09880
Position (kb)
2074
2075
2076 Strain fitness (log2 ratio)
-1
0
1 at 2073.464 kb on - strand, within BWI76_RS09870 at 2073.577 kb on + strand, within BWI76_RS09870 at 2073.605 kb on + strand, within BWI76_RS09870 at 2073.769 kb on + strand, within BWI76_RS09870 at 2073.866 kb on + strand, within BWI76_RS09870 at 2073.874 kb on - strand, within BWI76_RS09870 at 2073.874 kb on - strand, within BWI76_RS09870 at 2073.874 kb on - strand, within BWI76_RS09870 at 2073.879 kb on + strand, within BWI76_RS09870 at 2073.995 kb on - strand at 2074.455 kb on - strand, within BWI76_RS09875 at 2074.528 kb on + strand, within BWI76_RS09875 at 2074.544 kb on - strand, within BWI76_RS09875 at 2074.557 kb on - strand, within BWI76_RS09875 at 2074.557 kb on - strand, within BWI76_RS09875 at 2074.672 kb on - strand, within BWI76_RS09875 at 2074.845 kb on - strand, within BWI76_RS09875 at 2074.857 kb on + strand, within BWI76_RS09875 at 2074.865 kb on - strand, within BWI76_RS09875 at 2075.040 kb on - strand, within BWI76_RS09875 at 2075.401 kb on + strand at 2075.409 kb on - strand at 2075.751 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (N) remove 2,073,464 - BWI76_RS09870 0.54 -0.8 2,073,577 + BWI76_RS09870 0.64 +0.1 2,073,605 + BWI76_RS09870 0.66 -0.6 2,073,769 + BWI76_RS09870 0.80 -0.4 2,073,866 + BWI76_RS09870 0.88 -0.1 2,073,874 - BWI76_RS09870 0.89 +1.1 2,073,874 - BWI76_RS09870 0.89 -0.6 2,073,874 - BWI76_RS09870 0.89 -0.7 2,073,879 + BWI76_RS09870 0.89 -0.3 2,073,995 - -1.0 2,074,455 - BWI76_RS09875 0.24 +0.3 2,074,528 + BWI76_RS09875 0.31 +0.1 2,074,544 - BWI76_RS09875 0.32 +0.8 2,074,557 - BWI76_RS09875 0.34 +0.6 2,074,557 - BWI76_RS09875 0.34 +0.4 2,074,672 - BWI76_RS09875 0.44 +0.7 2,074,845 - BWI76_RS09875 0.60 -1.3 2,074,857 + BWI76_RS09875 0.61 +0.4 2,074,865 - BWI76_RS09875 0.62 +0.7 2,075,040 - BWI76_RS09875 0.78 +0.2 2,075,401 + +0.1 2,075,409 - +0.5 2,075,751 + -0.8
Or see this region's nucleotide sequence