Experiment: 6 day starvation, 30C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2194 and DvMF_2195 overlap by 4 nucleotides DvMF_2195 and DvMF_2196 are separated by 184 nucleotides
DvMF_2194: DvMF_2194 - permease (RefSeq), at 2,740,607 to 2,741,704
_2194
DvMF_2195: DvMF_2195 - hypothetical protein (RefSeq), at 2,741,701 to 2,742,951
_2195
DvMF_2196: DvMF_2196 - FAD linked oxidase domain protein (RefSeq), at 2,743,136 to 2,745,964
_2196
Position (kb)
2741
2742
2743 Strain fitness (log2 ratio)
-1
0
1 at 2740.793 kb on + strand, within DvMF_2194 at 2740.801 kb on - strand, within DvMF_2194 at 2740.823 kb on - strand, within DvMF_2194 at 2740.973 kb on + strand, within DvMF_2194 at 2741.199 kb on - strand, within DvMF_2194 at 2741.264 kb on - strand, within DvMF_2194 at 2741.282 kb on + strand, within DvMF_2194 at 2741.394 kb on + strand, within DvMF_2194 at 2741.394 kb on + strand, within DvMF_2194 at 2741.402 kb on - strand, within DvMF_2194 at 2741.402 kb on - strand, within DvMF_2194 at 2741.402 kb on - strand, within DvMF_2194 at 2741.402 kb on - strand, within DvMF_2194 at 2741.451 kb on - strand, within DvMF_2194 at 2741.543 kb on + strand, within DvMF_2194 at 2741.570 kb on + strand, within DvMF_2194 at 2741.693 kb on - strand at 2741.763 kb on + strand at 2741.771 kb on - strand at 2742.009 kb on + strand, within DvMF_2195 at 2742.397 kb on + strand, within DvMF_2195 at 2742.769 kb on + strand, within DvMF_2195 at 2742.769 kb on - strand, within DvMF_2195 at 2742.815 kb on + strand, within DvMF_2195 at 2742.823 kb on - strand, within DvMF_2195 at 2742.975 kb on + strand at 2743.030 kb on - strand at 2743.308 kb on - strand at 2743.687 kb on - strand, within DvMF_2196 at 2743.728 kb on - strand, within DvMF_2196 at 2743.901 kb on - strand, within DvMF_2196
Per-strain Table
Position Strand Gene LocusTag Fraction 6 day starvation, 30C remove 2,740,793 + DvMF_2194 0.17 +1.0 2,740,801 - DvMF_2194 0.18 +0.5 2,740,823 - DvMF_2194 0.20 +0.3 2,740,973 + DvMF_2194 0.33 +0.1 2,741,199 - DvMF_2194 0.54 +0.6 2,741,264 - DvMF_2194 0.60 +0.5 2,741,282 + DvMF_2194 0.61 +1.7 2,741,394 + DvMF_2194 0.72 +0.6 2,741,394 + DvMF_2194 0.72 +0.2 2,741,402 - DvMF_2194 0.72 +0.8 2,741,402 - DvMF_2194 0.72 +0.7 2,741,402 - DvMF_2194 0.72 +0.2 2,741,402 - DvMF_2194 0.72 -0.2 2,741,451 - DvMF_2194 0.77 +0.2 2,741,543 + DvMF_2194 0.85 +0.3 2,741,570 + DvMF_2194 0.88 +0.5 2,741,693 - +0.8 2,741,763 + +0.3 2,741,771 - +0.7 2,742,009 + DvMF_2195 0.25 +0.6 2,742,397 + DvMF_2195 0.56 +0.7 2,742,769 + DvMF_2195 0.85 +0.2 2,742,769 - DvMF_2195 0.85 +0.7 2,742,815 + DvMF_2195 0.89 +1.2 2,742,823 - DvMF_2195 0.90 +0.5 2,742,975 + +0.3 2,743,030 - +0.8 2,743,308 - +0.0 2,743,687 - DvMF_2196 0.19 +0.7 2,743,728 - DvMF_2196 0.21 +0.6 2,743,901 - DvMF_2196 0.27 +0.4
Or see this region's nucleotide sequence