Experiment: 6 day starvation, 30C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1231 and DvMF_1232 overlap by 4 nucleotides DvMF_1232 and DvMF_1233 overlap by 1 nucleotides DvMF_1233 and DvMF_1234 are separated by 445 nucleotides
DvMF_1231: DvMF_1231 - Molybdopterin-guanine dinucleotide biosynthesis protein A-like protein (RefSeq), at 1,519,531 to 1,520,403
_1231
DvMF_1232: DvMF_1232 - formate dehydrogenase accessory protein FdhD, putative (RefSeq), at 1,520,400 to 1,521,224
_1232
DvMF_1233: DvMF_1233 - formate dehydrogenase accessory protein (RefSeq), at 1,521,224 to 1,522,135
_1233
DvMF_1234: DvMF_1234 - methionine-R-sulfoxide reductase (RefSeq), at 1,522,581 to 1,523,453
_1234
Position (kb)
1521
1522
1523 Strain fitness (log2 ratio)
-1
0
1 at 1520.331 kb on - strand at 1520.494 kb on - strand, within DvMF_1232 at 1520.689 kb on - strand, within DvMF_1232 at 1520.762 kb on - strand, within DvMF_1232 at 1520.969 kb on + strand, within DvMF_1232 at 1521.041 kb on - strand, within DvMF_1232 at 1521.238 kb on - strand at 1521.356 kb on + strand, within DvMF_1233 at 1521.512 kb on - strand, within DvMF_1233 at 1521.681 kb on - strand, within DvMF_1233 at 1521.751 kb on - strand, within DvMF_1233 at 1521.803 kb on - strand, within DvMF_1233 at 1521.846 kb on - strand, within DvMF_1233 at 1522.071 kb on + strand at 1522.242 kb on + strand at 1522.252 kb on - strand at 1522.366 kb on + strand at 1522.451 kb on + strand at 1522.478 kb on - strand at 1522.478 kb on - strand at 1523.062 kb on - strand, within DvMF_1234
Per-strain Table
Position Strand Gene LocusTag Fraction 6 day starvation, 30C remove 1,520,331 - +0.0 1,520,494 - DvMF_1232 0.11 +0.5 1,520,689 - DvMF_1232 0.35 +0.5 1,520,762 - DvMF_1232 0.44 +0.4 1,520,969 + DvMF_1232 0.69 +0.9 1,521,041 - DvMF_1232 0.78 +0.1 1,521,238 - +1.1 1,521,356 + DvMF_1233 0.14 +0.8 1,521,512 - DvMF_1233 0.32 +0.8 1,521,681 - DvMF_1233 0.50 +0.3 1,521,751 - DvMF_1233 0.58 +0.6 1,521,803 - DvMF_1233 0.63 +0.8 1,521,846 - DvMF_1233 0.68 +0.7 1,522,071 + +0.3 1,522,242 + +0.6 1,522,252 - -0.3 1,522,366 + +0.1 1,522,451 + -0.1 1,522,478 - +0.5 1,522,478 - +0.4 1,523,062 - DvMF_1234 0.55 +1.0
Or see this region's nucleotide sequence