Experiment: 6 day starvation, 30C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1069 and DvMF_1070 are separated by 19 nucleotides DvMF_1070 and DvMF_1071 are separated by 84 nucleotides DvMF_1071 and DvMF_1072 overlap by 4 nucleotides
DvMF_1069: DvMF_1069 - hypothetical protein (RefSeq), at 1,309,598 to 1,310,512
_1069
DvMF_1070: DvMF_1070 - hypothetical protein (RefSeq), at 1,310,532 to 1,311,197
_1070
DvMF_1071: DvMF_1071 - hypothetical protein (RefSeq), at 1,311,282 to 1,311,773
_1071
DvMF_1072: DvMF_1072 - hypothetical protein (RefSeq), at 1,311,770 to 1,313,557
_1072
Position (kb)
1310
1311
1312 Strain fitness (log2 ratio)
-1
0
1 at 1309.587 kb on + strand at 1309.615 kb on + strand at 1309.741 kb on - strand, within DvMF_1069 at 1310.014 kb on + strand, within DvMF_1069 at 1310.188 kb on - strand, within DvMF_1069 at 1310.286 kb on + strand, within DvMF_1069 at 1310.549 kb on + strand at 1310.872 kb on + strand, within DvMF_1070 at 1310.882 kb on + strand, within DvMF_1070 at 1310.882 kb on + strand, within DvMF_1070 at 1310.971 kb on - strand, within DvMF_1070 at 1311.046 kb on - strand, within DvMF_1070 at 1311.319 kb on + strand at 1311.645 kb on - strand, within DvMF_1071 at 1311.646 kb on - strand, within DvMF_1071 at 1311.810 kb on - strand at 1311.846 kb on - strand at 1311.881 kb on + strand at 1311.978 kb on + strand, within DvMF_1072 at 1312.062 kb on + strand, within DvMF_1072
Per-strain Table
Position Strand Gene LocusTag Fraction 6 day starvation, 30C remove 1,309,587 + +1.3 1,309,615 + +0.5 1,309,741 - DvMF_1069 0.16 +0.7 1,310,014 + DvMF_1069 0.45 +0.8 1,310,188 - DvMF_1069 0.64 +0.2 1,310,286 + DvMF_1069 0.75 -0.2 1,310,549 + +0.6 1,310,872 + DvMF_1070 0.51 +0.7 1,310,882 + DvMF_1070 0.53 +0.8 1,310,882 + DvMF_1070 0.53 +0.6 1,310,971 - DvMF_1070 0.66 +1.1 1,311,046 - DvMF_1070 0.77 +0.5 1,311,319 + +1.5 1,311,645 - DvMF_1071 0.74 +1.0 1,311,646 - DvMF_1071 0.74 +0.7 1,311,810 - +0.2 1,311,846 - +0.7 1,311,881 + +0.2 1,311,978 + DvMF_1072 0.12 +0.9 1,312,062 + DvMF_1072 0.16 +0.7
Or see this region's nucleotide sequence