Experiment: 6 day starvation, 30C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0861 and DvMF_0862 overlap by 14 nucleotides DvMF_0862 and DvMF_0863 are separated by 243 nucleotides DvMF_0863 and DvMF_0864 are separated by 536 nucleotides
DvMF_0861: DvMF_0861 - polar amino acid ABC transporter, inner membrane subunit (RefSeq), at 1,037,292 to 1,038,083
_0861
DvMF_0862: DvMF_0862 - ABC transporter related (RefSeq), at 1,038,070 to 1,038,816
_0862
DvMF_0863: DvMF_0863 - hypothetical protein (RefSeq), at 1,039,060 to 1,039,740
_0863
DvMF_0864: DvMF_0864 - UTP-GlnB uridylyltransferase, GlnD (RefSeq), at 1,040,277 to 1,043,180
_0864
Position (kb) 1039
1040 Strain fitness (log2 ratio) -1
0
1 at 1038.283 kb on + strand, within DvMF_0862 at 1038.408 kb on + strand, within DvMF_0862 at 1038.544 kb on - strand, within DvMF_0862 at 1038.560 kb on + strand, within DvMF_0862 at 1038.910 kb on - strand at 1039.003 kb on - strand at 1039.124 kb on + strand at 1039.401 kb on - strand, within DvMF_0863 at 1040.295 kb on + strand at 1040.340 kb on + strand at 1040.460 kb on - strand at 1040.460 kb on - strand at 1040.714 kb on + strand, within DvMF_0864
Per-strain Table
Position Strand Gene LocusTag Fraction 6 day starvation, 30C remove 1,038,283 + DvMF_0862 0.29 +0.3 1,038,408 + DvMF_0862 0.45 +0.7 1,038,544 - DvMF_0862 0.63 +0.4 1,038,560 + DvMF_0862 0.66 +0.9 1,038,910 - +0.1 1,039,003 - +0.6 1,039,124 + +0.5 1,039,401 - DvMF_0863 0.50 -0.1 1,040,295 + +0.7 1,040,340 + +0.4 1,040,460 - +0.6 1,040,460 - +0.7 1,040,714 + DvMF_0864 0.15 +0.7
Or see this region's nucleotide sequence