Experiment: 6 day starvation, 30C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0318 and DvMF_0319 are separated by 209 nucleotides DvMF_0319 and DvMF_0320 are separated by 10 nucleotides DvMF_0320 and DvMF_0321 are separated by 525 nucleotides
DvMF_0318: DvMF_0318 - Exonuclease RNase T and DNA polymerase III (RefSeq), at 369,894 to 370,697
_0318
DvMF_0319: DvMF_0319 - 4Fe-4S ferredoxin iron-sulfur binding domain protein (RefSeq), at 370,907 to 371,416
_0319
DvMF_0320: DvMF_0320 - Formate dehydrogenase (RefSeq), at 371,427 to 373,529
_0320
DvMF_0321: DvMF_0321 - iron-containing alcohol dehydrogenase (RefSeq), at 374,055 to 375,236
_0321
Position (kb) 371
372
373
374 Strain fitness (log2 ratio) -1
0
1 at 370.509 kb on - strand, within DvMF_0318 at 370.513 kb on + strand, within DvMF_0318 at 370.559 kb on - strand, within DvMF_0318 at 370.637 kb on - strand at 370.796 kb on - strand at 370.899 kb on + strand at 370.956 kb on - strand at 371.266 kb on - strand, within DvMF_0319 at 371.295 kb on + strand, within DvMF_0319 at 371.344 kb on - strand, within DvMF_0319 at 371.434 kb on - strand at 371.443 kb on + strand at 371.451 kb on - strand at 371.542 kb on + strand at 371.542 kb on + strand at 371.550 kb on - strand at 371.775 kb on - strand, within DvMF_0320 at 371.779 kb on + strand, within DvMF_0320 at 371.785 kb on - strand, within DvMF_0320 at 371.862 kb on - strand, within DvMF_0320 at 371.934 kb on + strand, within DvMF_0320 at 372.016 kb on + strand, within DvMF_0320 at 372.233 kb on - strand, within DvMF_0320 at 372.376 kb on + strand, within DvMF_0320 at 372.737 kb on - strand, within DvMF_0320 at 372.762 kb on - strand, within DvMF_0320 at 372.777 kb on - strand, within DvMF_0320 at 372.842 kb on + strand, within DvMF_0320 at 372.869 kb on - strand, within DvMF_0320 at 372.982 kb on + strand, within DvMF_0320 at 372.982 kb on + strand, within DvMF_0320 at 372.990 kb on - strand, within DvMF_0320 at 373.154 kb on + strand, within DvMF_0320 at 373.162 kb on - strand, within DvMF_0320 at 373.184 kb on + strand, within DvMF_0320 at 373.187 kb on - strand, within DvMF_0320 at 373.238 kb on - strand, within DvMF_0320 at 373.398 kb on + strand at 373.413 kb on - strand at 373.413 kb on - strand at 373.444 kb on + strand at 373.477 kb on - strand at 373.519 kb on - strand at 373.519 kb on - strand at 373.535 kb on + strand at 373.666 kb on - strand at 373.781 kb on - strand at 373.852 kb on - strand at 373.930 kb on + strand at 373.990 kb on - strand at 373.990 kb on - strand at 373.990 kb on - strand at 374.038 kb on - strand at 374.072 kb on + strand at 374.072 kb on + strand at 374.072 kb on + strand at 374.095 kb on + strand at 374.103 kb on - strand at 374.158 kb on + strand at 374.158 kb on + strand at 374.158 kb on + strand at 374.270 kb on - strand, within DvMF_0321 at 374.341 kb on + strand, within DvMF_0321
Per-strain Table
Position Strand Gene LocusTag Fraction 6 day starvation, 30C remove 370,509 - DvMF_0318 0.76 +1.5 370,513 + DvMF_0318 0.77 +0.4 370,559 - DvMF_0318 0.83 +0.2 370,637 - +0.1 370,796 - +0.4 370,899 + -0.0 370,956 - +0.4 371,266 - DvMF_0319 0.70 +0.4 371,295 + DvMF_0319 0.76 +1.1 371,344 - DvMF_0319 0.86 -1.3 371,434 - +0.5 371,443 + +0.7 371,451 - +0.5 371,542 + -0.2 371,542 + -0.5 371,550 - -0.4 371,775 - DvMF_0320 0.17 +0.4 371,779 + DvMF_0320 0.17 -0.8 371,785 - DvMF_0320 0.17 +0.3 371,862 - DvMF_0320 0.21 +0.8 371,934 + DvMF_0320 0.24 +0.1 372,016 + DvMF_0320 0.28 -1.2 372,233 - DvMF_0320 0.38 +1.5 372,376 + DvMF_0320 0.45 +0.4 372,737 - DvMF_0320 0.62 +0.3 372,762 - DvMF_0320 0.63 -0.1 372,777 - DvMF_0320 0.64 +0.4 372,842 + DvMF_0320 0.67 -0.4 372,869 - DvMF_0320 0.69 +0.2 372,982 + DvMF_0320 0.74 +1.5 372,982 + DvMF_0320 0.74 +0.5 372,990 - DvMF_0320 0.74 -0.1 373,154 + DvMF_0320 0.82 +0.1 373,162 - DvMF_0320 0.83 +0.3 373,184 + DvMF_0320 0.84 +0.3 373,187 - DvMF_0320 0.84 -0.1 373,238 - DvMF_0320 0.86 -0.3 373,398 + +0.2 373,413 - +0.3 373,413 - -0.3 373,444 + -0.6 373,477 - +1.1 373,519 - +1.0 373,519 - -1.0 373,535 + +1.0 373,666 - +1.0 373,781 - -0.3 373,852 - +0.9 373,930 + -0.5 373,990 - +0.4 373,990 - +1.6 373,990 - +0.7 374,038 - +0.5 374,072 + -0.7 374,072 + -0.5 374,072 + -1.1 374,095 + -1.2 374,103 - -0.8 374,158 + -1.1 374,158 + -0.4 374,158 + -0.7 374,270 - DvMF_0321 0.18 +0.0 374,341 + DvMF_0321 0.24 -0.8
Or see this region's nucleotide sequence