Experiment: molybdate 0.25 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_972 and Pf6N2E2_973 are separated by 222 nucleotides Pf6N2E2_973 and Pf6N2E2_974 are separated by 2 nucleotides Pf6N2E2_974 and Pf6N2E2_975 are separated by 137 nucleotides
Pf6N2E2_972 - DNA topoisomerase III (EC 5.99.1.2) in PFGI-1-like cluster, at 1,140,070 to 1,142,037
_972
Pf6N2E2_973 - Single-stranded DNA-binding protein, at 1,142,260 to 1,142,730
_973
Pf6N2E2_974 - Integrase regulator R, at 1,142,733 to 1,143,104
_974
Pf6N2E2_975 - FIG141694: hypothetical protein in PFGI-1-like cluster, at 1,143,242 to 1,143,997
_975
Position (kb)
1142
1143
1144 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1141.758 kb on + strand, within Pf6N2E2_972 at 1141.759 kb on - strand, within Pf6N2E2_972 at 1141.846 kb on + strand at 1141.883 kb on + strand at 1141.884 kb on - strand at 1141.884 kb on - strand at 1141.920 kb on + strand at 1142.037 kb on + strand at 1142.037 kb on + strand at 1142.037 kb on + strand at 1142.037 kb on + strand at 1142.038 kb on - strand at 1142.038 kb on - strand at 1142.038 kb on - strand at 1142.093 kb on + strand at 1142.093 kb on + strand at 1142.122 kb on + strand at 1142.122 kb on + strand at 1142.122 kb on + strand at 1142.122 kb on + strand at 1142.123 kb on - strand at 1142.125 kb on + strand at 1142.125 kb on + strand at 1142.126 kb on - strand at 1142.126 kb on - strand at 1142.126 kb on - strand at 1142.160 kb on + strand at 1142.161 kb on - strand at 1142.163 kb on + strand at 1142.163 kb on + strand at 1142.163 kb on + strand at 1142.170 kb on + strand at 1142.171 kb on - strand at 1142.171 kb on - strand at 1142.171 kb on - strand at 1142.246 kb on - strand at 1142.258 kb on - strand at 1142.508 kb on + strand, within Pf6N2E2_973 at 1142.509 kb on - strand, within Pf6N2E2_973 at 1142.509 kb on - strand, within Pf6N2E2_973 at 1142.509 kb on - strand, within Pf6N2E2_973 at 1142.509 kb on - strand, within Pf6N2E2_973 at 1142.509 kb on - strand, within Pf6N2E2_973 at 1142.519 kb on + strand, within Pf6N2E2_973 at 1142.527 kb on - strand, within Pf6N2E2_973 at 1142.591 kb on + strand, within Pf6N2E2_973 at 1142.591 kb on + strand, within Pf6N2E2_973 at 1142.592 kb on - strand, within Pf6N2E2_973 at 1142.595 kb on + strand, within Pf6N2E2_973 at 1142.734 kb on + strand at 1142.734 kb on + strand at 1142.734 kb on + strand at 1142.734 kb on + strand at 1142.734 kb on + strand at 1142.734 kb on + strand at 1142.734 kb on + strand at 1142.734 kb on + strand at 1142.735 kb on - strand at 1142.735 kb on - strand at 1142.735 kb on - strand at 1142.735 kb on - strand at 1142.736 kb on + strand at 1142.736 kb on + strand at 1142.889 kb on + strand, within Pf6N2E2_974 at 1143.073 kb on + strand at 1143.078 kb on + strand at 1143.078 kb on + strand at 1143.078 kb on + strand at 1143.079 kb on - strand at 1143.079 kb on - strand at 1143.138 kb on - strand at 1143.138 kb on - strand at 1143.159 kb on + strand at 1143.159 kb on + strand at 1143.160 kb on - strand at 1143.160 kb on - strand at 1143.245 kb on + strand at 1143.245 kb on + strand at 1143.245 kb on + strand at 1143.245 kb on + strand at 1143.245 kb on + strand at 1143.246 kb on - strand at 1143.246 kb on - strand at 1143.446 kb on - strand, within Pf6N2E2_975 at 1143.446 kb on - strand, within Pf6N2E2_975 at 1143.446 kb on - strand, within Pf6N2E2_975 at 1143.575 kb on + strand, within Pf6N2E2_975 at 1143.581 kb on - strand, within Pf6N2E2_975 at 1143.600 kb on + strand, within Pf6N2E2_975 at 1143.615 kb on + strand, within Pf6N2E2_975 at 1143.615 kb on + strand, within Pf6N2E2_975 at 1143.615 kb on + strand, within Pf6N2E2_975 at 1143.648 kb on + strand, within Pf6N2E2_975 at 1143.648 kb on + strand, within Pf6N2E2_975 at 1143.649 kb on - strand, within Pf6N2E2_975 at 1143.656 kb on + strand, within Pf6N2E2_975 at 1143.657 kb on - strand, within Pf6N2E2_975 at 1143.807 kb on + strand, within Pf6N2E2_975 at 1143.858 kb on + strand, within Pf6N2E2_975 at 1144.013 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction molybdate 0.25 M remove 1,141,758 + Pf6N2E2_972 0.86 +0.1 1,141,759 - Pf6N2E2_972 0.86 +0.5 1,141,846 + +1.0 1,141,883 + +1.1 1,141,884 - +1.5 1,141,884 - +0.7 1,141,920 + -0.5 1,142,037 + +0.4 1,142,037 + +1.0 1,142,037 + +0.1 1,142,037 + +0.1 1,142,038 - -0.5 1,142,038 - -1.1 1,142,038 - +0.7 1,142,093 + +0.7 1,142,093 + -1.3 1,142,122 + -0.3 1,142,122 + -1.4 1,142,122 + -0.5 1,142,122 + -1.2 1,142,123 - +0.4 1,142,125 + +1.0 1,142,125 + -1.4 1,142,126 - +1.0 1,142,126 - -0.4 1,142,126 - -0.1 1,142,160 + +0.7 1,142,161 - -0.5 1,142,163 + +1.3 1,142,163 + -0.2 1,142,163 + -0.2 1,142,170 + -1.7 1,142,171 - -0.7 1,142,171 - -0.7 1,142,171 - +1.0 1,142,246 - -1.4 1,142,258 - -0.8 1,142,508 + Pf6N2E2_973 0.53 -0.5 1,142,509 - Pf6N2E2_973 0.53 -0.8 1,142,509 - Pf6N2E2_973 0.53 +0.7 1,142,509 - Pf6N2E2_973 0.53 -0.6 1,142,509 - Pf6N2E2_973 0.53 +1.0 1,142,509 - Pf6N2E2_973 0.53 +0.1 1,142,519 + Pf6N2E2_973 0.55 +1.7 1,142,527 - Pf6N2E2_973 0.57 +0.0 1,142,591 + Pf6N2E2_973 0.70 +0.3 1,142,591 + Pf6N2E2_973 0.70 -1.1 1,142,592 - Pf6N2E2_973 0.70 +0.7 1,142,595 + Pf6N2E2_973 0.71 +2.2 1,142,734 + +1.3 1,142,734 + +0.3 1,142,734 + +0.0 1,142,734 + -0.6 1,142,734 + -1.3 1,142,734 + +0.7 1,142,734 + -0.8 1,142,734 + +0.7 1,142,735 - -0.3 1,142,735 - -0.3 1,142,735 - -0.6 1,142,735 - -2.0 1,142,736 + -0.1 1,142,736 + -0.7 1,142,889 + Pf6N2E2_974 0.42 -0.1 1,143,073 + +0.1 1,143,078 + -0.9 1,143,078 + +1.0 1,143,078 + +0.4 1,143,079 - +0.7 1,143,079 - -0.7 1,143,138 - +1.2 1,143,138 - -0.9 1,143,159 + +1.1 1,143,159 + +0.2 1,143,160 - +0.5 1,143,160 - +1.3 1,143,245 + -0.3 1,143,245 + +1.3 1,143,245 + -0.5 1,143,245 + +1.0 1,143,245 + -0.2 1,143,246 - -0.5 1,143,246 - +0.6 1,143,446 - Pf6N2E2_975 0.27 +1.3 1,143,446 - Pf6N2E2_975 0.27 -0.4 1,143,446 - Pf6N2E2_975 0.27 -0.7 1,143,575 + Pf6N2E2_975 0.44 +3.3 1,143,581 - Pf6N2E2_975 0.45 +0.7 1,143,600 + Pf6N2E2_975 0.47 -0.1 1,143,615 + Pf6N2E2_975 0.49 +0.6 1,143,615 + Pf6N2E2_975 0.49 +2.1 1,143,615 + Pf6N2E2_975 0.49 -0.9 1,143,648 + Pf6N2E2_975 0.54 +0.5 1,143,648 + Pf6N2E2_975 0.54 -0.6 1,143,649 - Pf6N2E2_975 0.54 -0.3 1,143,656 + Pf6N2E2_975 0.55 -1.3 1,143,657 - Pf6N2E2_975 0.55 -1.4 1,143,807 + Pf6N2E2_975 0.75 -0.2 1,143,858 + Pf6N2E2_975 0.81 -0.8 1,144,013 + -0.7
Or see this region's nucleotide sequence