Experiment: molybdate 0.25 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_670 and Pf6N2E2_671 are separated by 214 nucleotides Pf6N2E2_671 and Pf6N2E2_672 are separated by 51 nucleotides Pf6N2E2_672 and Pf6N2E2_673 overlap by 8 nucleotides
Pf6N2E2_670 - 1-pyrroline-4-hydroxy-2-carboxylate deaminase (EC 3.5.4.22), at 775,083 to 776,000
_670
Pf6N2E2_671 - 2-methylaconitate racemase, at 776,215 to 777,243
_671
Pf6N2E2_672 - ABC-type polar amino acid transport system, ATPase component, at 777,295 to 778,017
_672
Pf6N2E2_673 - Probable permease of ABC transporter, at 778,010 to 778,660
_673
Position (kb) 776
777
778 Strain fitness (log2 ratio) -2
-1
0
1
2 at 775.288 kb on + strand, within Pf6N2E2_670 at 775.288 kb on + strand at 775.289 kb on - strand, within Pf6N2E2_670 at 775.289 kb on - strand, within Pf6N2E2_670 at 775.289 kb on - strand, within Pf6N2E2_670 at 775.416 kb on + strand, within Pf6N2E2_670 at 775.416 kb on + strand, within Pf6N2E2_670 at 775.416 kb on + strand, within Pf6N2E2_670 at 775.417 kb on - strand, within Pf6N2E2_670 at 775.570 kb on + strand, within Pf6N2E2_670 at 775.570 kb on + strand, within Pf6N2E2_670 at 775.571 kb on - strand, within Pf6N2E2_670 at 775.571 kb on - strand, within Pf6N2E2_670 at 775.588 kb on + strand, within Pf6N2E2_670 at 775.589 kb on - strand, within Pf6N2E2_670 at 775.589 kb on - strand, within Pf6N2E2_670 at 775.589 kb on - strand, within Pf6N2E2_670 at 775.663 kb on + strand, within Pf6N2E2_670 at 775.663 kb on + strand, within Pf6N2E2_670 at 776.032 kb on + strand at 776.034 kb on + strand at 776.034 kb on + strand at 776.034 kb on + strand at 776.034 kb on + strand at 776.034 kb on + strand at 776.034 kb on + strand at 776.034 kb on + strand at 776.035 kb on - strand at 776.035 kb on - strand at 776.035 kb on - strand at 776.035 kb on - strand at 776.042 kb on + strand at 776.043 kb on - strand at 776.057 kb on + strand at 776.057 kb on + strand at 776.057 kb on + strand at 776.057 kb on + strand at 776.057 kb on + strand at 776.058 kb on - strand at 776.058 kb on - strand at 776.061 kb on + strand at 776.062 kb on - strand at 776.062 kb on - strand at 776.062 kb on - strand at 776.117 kb on + strand at 776.117 kb on + strand at 776.141 kb on + strand at 776.328 kb on - strand, within Pf6N2E2_671 at 776.406 kb on + strand, within Pf6N2E2_671 at 776.406 kb on + strand, within Pf6N2E2_671 at 776.454 kb on + strand, within Pf6N2E2_671 at 776.454 kb on + strand, within Pf6N2E2_671 at 776.739 kb on - strand, within Pf6N2E2_671 at 777.217 kb on + strand at 777.217 kb on + strand at 777.218 kb on - strand at 777.218 kb on - strand at 777.494 kb on - strand, within Pf6N2E2_672 at 777.548 kb on + strand, within Pf6N2E2_672 at 777.548 kb on + strand, within Pf6N2E2_672 at 777.549 kb on - strand, within Pf6N2E2_672 at 778.078 kb on - strand, within Pf6N2E2_673 at 778.078 kb on - strand, within Pf6N2E2_673 at 778.081 kb on - strand, within Pf6N2E2_673
Per-strain Table
Position Strand Gene LocusTag Fraction molybdate 0.25 M remove 775,288 + Pf6N2E2_670 0.22 -0.7 775,288 + +0.8 775,289 - Pf6N2E2_670 0.22 -2.1 775,289 - Pf6N2E2_670 0.22 -0.3 775,289 - Pf6N2E2_670 0.22 -0.9 775,416 + Pf6N2E2_670 0.36 -0.0 775,416 + Pf6N2E2_670 0.36 +2.6 775,416 + Pf6N2E2_670 0.36 -1.6 775,417 - Pf6N2E2_670 0.36 +0.1 775,570 + Pf6N2E2_670 0.53 -2.3 775,570 + Pf6N2E2_670 0.53 -0.8 775,571 - Pf6N2E2_670 0.53 -0.4 775,571 - Pf6N2E2_670 0.53 +0.2 775,588 + Pf6N2E2_670 0.55 -0.5 775,589 - Pf6N2E2_670 0.55 +0.2 775,589 - Pf6N2E2_670 0.55 -0.9 775,589 - Pf6N2E2_670 0.55 -0.9 775,663 + Pf6N2E2_670 0.63 +0.1 775,663 + Pf6N2E2_670 0.63 -1.4 776,032 + -0.7 776,034 + -1.2 776,034 + +0.4 776,034 + -1.5 776,034 + -0.9 776,034 + -0.0 776,034 + +0.9 776,034 + -0.3 776,035 - +0.4 776,035 - -2.0 776,035 - -0.0 776,035 - +0.2 776,042 + +2.1 776,043 - -0.3 776,057 + -0.2 776,057 + +0.6 776,057 + +1.2 776,057 + -1.5 776,057 + +0.3 776,058 - +0.5 776,058 - -0.3 776,061 + -0.6 776,062 - -0.1 776,062 - -0.1 776,062 - +0.4 776,117 + +2.0 776,117 + +0.5 776,141 + +0.2 776,328 - Pf6N2E2_671 0.11 -0.8 776,406 + Pf6N2E2_671 0.19 +1.4 776,406 + Pf6N2E2_671 0.19 +2.4 776,454 + Pf6N2E2_671 0.23 +0.8 776,454 + Pf6N2E2_671 0.23 +0.1 776,739 - Pf6N2E2_671 0.51 +0.8 777,217 + +0.8 777,217 + +0.6 777,218 - -1.8 777,218 - -0.5 777,494 - Pf6N2E2_672 0.28 +0.2 777,548 + Pf6N2E2_672 0.35 +0.7 777,548 + Pf6N2E2_672 0.35 +0.5 777,549 - Pf6N2E2_672 0.35 -0.1 778,078 - Pf6N2E2_673 0.10 -1.4 778,078 - Pf6N2E2_673 0.10 -0.1 778,081 - Pf6N2E2_673 0.11 -0.2
Or see this region's nucleotide sequence