Experiment: molybdate 0.25 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_5946 and Pf6N2E2_5947 are separated by 138 nucleotides Pf6N2E2_5947 and Pf6N2E2_5948 are separated by 105 nucleotides Pf6N2E2_5948 and Pf6N2E2_5949 are separated by 83 nucleotides Pf6N2E2_5949 and Pf6N2E2_5950 are separated by 18 nucleotides
Pf6N2E2_5946 - Periplasmic serine proteases (ClpP class), at 6,767,267 to 6,768,256
_5946
Pf6N2E2_5947 - FIG146278: Maf/YceF/YhdE family protein, at 6,768,395 to 6,768,973
_5947
Pf6N2E2_5948 - COG1399 protein, clustered with ribosomal protein L32p, at 6,769,079 to 6,769,606
_5948
Pf6N2E2_5949 - hypothetical protein, at 6,769,690 to 6,769,929
_5949
Pf6N2E2_5950 - Phosphate:acyl-ACP acyltransferase PlsX, at 6,769,948 to 6,770,817
_5950
Position (kb)
6768
6769 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 6767.416 kb on + strand, within Pf6N2E2_5946 at 6767.416 kb on + strand, within Pf6N2E2_5946 at 6767.416 kb on + strand, within Pf6N2E2_5946 at 6767.417 kb on - strand, within Pf6N2E2_5946 at 6767.417 kb on - strand, within Pf6N2E2_5946 at 6767.417 kb on - strand, within Pf6N2E2_5946 at 6767.417 kb on - strand, within Pf6N2E2_5946 at 6767.417 kb on - strand, within Pf6N2E2_5946 at 6767.417 kb on - strand, within Pf6N2E2_5946 at 6767.417 kb on - strand, within Pf6N2E2_5946 at 6767.417 kb on - strand, within Pf6N2E2_5946 at 6767.417 kb on - strand, within Pf6N2E2_5946 at 6767.417 kb on - strand, within Pf6N2E2_5946 at 6767.420 kb on + strand, within Pf6N2E2_5946 at 6767.421 kb on - strand, within Pf6N2E2_5946 at 6767.421 kb on - strand, within Pf6N2E2_5946 at 6767.493 kb on - strand, within Pf6N2E2_5946 at 6767.493 kb on - strand, within Pf6N2E2_5946 at 6767.614 kb on + strand, within Pf6N2E2_5946 at 6767.657 kb on + strand, within Pf6N2E2_5946 at 6767.705 kb on + strand, within Pf6N2E2_5946 at 6767.705 kb on + strand, within Pf6N2E2_5946 at 6767.705 kb on + strand, within Pf6N2E2_5946 at 6767.705 kb on + strand, within Pf6N2E2_5946 at 6767.706 kb on - strand, within Pf6N2E2_5946 at 6767.706 kb on - strand, within Pf6N2E2_5946 at 6767.741 kb on + strand, within Pf6N2E2_5946 at 6767.741 kb on + strand, within Pf6N2E2_5946 at 6767.741 kb on + strand at 6767.744 kb on + strand, within Pf6N2E2_5946 at 6767.744 kb on + strand, within Pf6N2E2_5946 at 6767.744 kb on + strand, within Pf6N2E2_5946 at 6767.745 kb on - strand, within Pf6N2E2_5946 at 6767.745 kb on - strand, within Pf6N2E2_5946 at 6767.745 kb on - strand, within Pf6N2E2_5946 at 6767.745 kb on - strand, within Pf6N2E2_5946 at 6767.771 kb on + strand, within Pf6N2E2_5946 at 6767.771 kb on + strand, within Pf6N2E2_5946 at 6767.771 kb on + strand, within Pf6N2E2_5946 at 6767.771 kb on + strand, within Pf6N2E2_5946 at 6767.772 kb on - strand, within Pf6N2E2_5946 at 6767.772 kb on - strand, within Pf6N2E2_5946 at 6767.823 kb on - strand, within Pf6N2E2_5946 at 6767.845 kb on + strand, within Pf6N2E2_5946 at 6767.845 kb on + strand, within Pf6N2E2_5946 at 6767.845 kb on + strand, within Pf6N2E2_5946 at 6767.870 kb on + strand, within Pf6N2E2_5946 at 6767.870 kb on + strand, within Pf6N2E2_5946 at 6767.870 kb on + strand, within Pf6N2E2_5946 at 6767.870 kb on + strand, within Pf6N2E2_5946 at 6767.870 kb on + strand, within Pf6N2E2_5946 at 6767.870 kb on + strand, within Pf6N2E2_5946 at 6767.871 kb on - strand, within Pf6N2E2_5946 at 6767.872 kb on + strand, within Pf6N2E2_5946 at 6767.872 kb on + strand, within Pf6N2E2_5946 at 6767.872 kb on + strand, within Pf6N2E2_5946 at 6767.888 kb on - strand, within Pf6N2E2_5946 at 6767.888 kb on - strand, within Pf6N2E2_5946 at 6767.888 kb on - strand, within Pf6N2E2_5946 at 6768.427 kb on + strand at 6768.427 kb on + strand at 6768.427 kb on + strand at 6768.427 kb on + strand at 6768.427 kb on + strand at 6768.428 kb on - strand at 6768.495 kb on - strand, within Pf6N2E2_5947 at 6768.495 kb on - strand, within Pf6N2E2_5947 at 6768.495 kb on - strand, within Pf6N2E2_5947 at 6768.540 kb on + strand, within Pf6N2E2_5947 at 6768.540 kb on + strand, within Pf6N2E2_5947 at 6768.541 kb on - strand, within Pf6N2E2_5947 at 6768.541 kb on - strand, within Pf6N2E2_5947 at 6768.562 kb on - strand, within Pf6N2E2_5947 at 6768.604 kb on + strand, within Pf6N2E2_5947 at 6768.604 kb on + strand, within Pf6N2E2_5947 at 6768.605 kb on - strand, within Pf6N2E2_5947 at 6768.959 kb on + strand at 6768.959 kb on + strand at 6768.959 kb on + strand at 6768.959 kb on + strand at 6768.959 kb on + strand at 6768.960 kb on - strand at 6768.962 kb on + strand at 6769.003 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction molybdate 0.25 M remove 6,767,416 + Pf6N2E2_5946 0.15 +1.3 6,767,416 + Pf6N2E2_5946 0.15 -0.9 6,767,416 + Pf6N2E2_5946 0.15 -0.3 6,767,417 - Pf6N2E2_5946 0.15 -0.2 6,767,417 - Pf6N2E2_5946 0.15 +0.7 6,767,417 - Pf6N2E2_5946 0.15 +0.7 6,767,417 - Pf6N2E2_5946 0.15 -0.4 6,767,417 - Pf6N2E2_5946 0.15 -1.2 6,767,417 - Pf6N2E2_5946 0.15 -1.5 6,767,417 - Pf6N2E2_5946 0.15 +0.2 6,767,417 - Pf6N2E2_5946 0.15 +1.5 6,767,417 - Pf6N2E2_5946 0.15 +0.1 6,767,417 - Pf6N2E2_5946 0.15 +0.6 6,767,420 + Pf6N2E2_5946 0.15 +0.6 6,767,421 - Pf6N2E2_5946 0.16 +0.7 6,767,421 - Pf6N2E2_5946 0.16 -0.1 6,767,493 - Pf6N2E2_5946 0.23 -0.3 6,767,493 - Pf6N2E2_5946 0.23 -0.3 6,767,614 + Pf6N2E2_5946 0.35 +0.4 6,767,657 + Pf6N2E2_5946 0.39 +0.3 6,767,705 + Pf6N2E2_5946 0.44 +0.7 6,767,705 + Pf6N2E2_5946 0.44 -0.4 6,767,705 + Pf6N2E2_5946 0.44 +0.7 6,767,705 + Pf6N2E2_5946 0.44 +1.0 6,767,706 - Pf6N2E2_5946 0.44 +1.9 6,767,706 - Pf6N2E2_5946 0.44 -1.8 6,767,741 + Pf6N2E2_5946 0.48 -0.5 6,767,741 + Pf6N2E2_5946 0.48 +0.3 6,767,741 + +0.4 6,767,744 + Pf6N2E2_5946 0.48 +0.3 6,767,744 + Pf6N2E2_5946 0.48 -0.0 6,767,744 + Pf6N2E2_5946 0.48 +0.4 6,767,745 - Pf6N2E2_5946 0.48 -0.2 6,767,745 - Pf6N2E2_5946 0.48 +0.3 6,767,745 - Pf6N2E2_5946 0.48 +1.7 6,767,745 - Pf6N2E2_5946 0.48 +0.3 6,767,771 + Pf6N2E2_5946 0.51 -2.0 6,767,771 + Pf6N2E2_5946 0.51 -1.5 6,767,771 + Pf6N2E2_5946 0.51 +0.4 6,767,771 + Pf6N2E2_5946 0.51 -0.3 6,767,772 - Pf6N2E2_5946 0.51 -0.8 6,767,772 - Pf6N2E2_5946 0.51 -0.6 6,767,823 - Pf6N2E2_5946 0.56 +0.3 6,767,845 + Pf6N2E2_5946 0.58 +0.1 6,767,845 + Pf6N2E2_5946 0.58 +1.1 6,767,845 + Pf6N2E2_5946 0.58 +0.6 6,767,870 + Pf6N2E2_5946 0.61 +1.1 6,767,870 + Pf6N2E2_5946 0.61 -0.2 6,767,870 + Pf6N2E2_5946 0.61 +0.3 6,767,870 + Pf6N2E2_5946 0.61 -0.1 6,767,870 + Pf6N2E2_5946 0.61 +0.5 6,767,870 + Pf6N2E2_5946 0.61 -0.1 6,767,871 - Pf6N2E2_5946 0.61 -2.0 6,767,872 + Pf6N2E2_5946 0.61 +0.5 6,767,872 + Pf6N2E2_5946 0.61 +1.7 6,767,872 + Pf6N2E2_5946 0.61 -0.3 6,767,888 - Pf6N2E2_5946 0.63 +1.0 6,767,888 - Pf6N2E2_5946 0.63 -1.2 6,767,888 - Pf6N2E2_5946 0.63 +0.7 6,768,427 + -0.4 6,768,427 + -1.6 6,768,427 + +1.7 6,768,427 + +1.0 6,768,427 + +0.2 6,768,428 - +0.1 6,768,495 - Pf6N2E2_5947 0.17 -1.2 6,768,495 - Pf6N2E2_5947 0.17 -2.4 6,768,495 - Pf6N2E2_5947 0.17 -0.8 6,768,540 + Pf6N2E2_5947 0.25 -1.1 6,768,540 + Pf6N2E2_5947 0.25 -1.2 6,768,541 - Pf6N2E2_5947 0.25 +0.1 6,768,541 - Pf6N2E2_5947 0.25 -2.2 6,768,562 - Pf6N2E2_5947 0.29 +0.1 6,768,604 + Pf6N2E2_5947 0.36 -1.3 6,768,604 + Pf6N2E2_5947 0.36 -0.7 6,768,605 - Pf6N2E2_5947 0.36 -0.8 6,768,959 + +0.5 6,768,959 + -1.2 6,768,959 + -0.3 6,768,959 + -0.7 6,768,959 + -0.8 6,768,960 - +1.1 6,768,962 + +0.1 6,769,003 + -0.2
Or see this region's nucleotide sequence