Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5721

Experiment: molybdate 0.25 M

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntPf6N2E2_5720 and Pf6N2E2_5721 are separated by 872 nucleotidesPf6N2E2_5721 and Pf6N2E2_5722 overlap by 1 nucleotides Pf6N2E2_5720 - BarA sensory histidine kinase (= VarS = GacS), at 6,533,821 to 6,536,676 _5720 Pf6N2E2_5721 - Cysteine synthase B (EC 2.5.1.47), at 6,537,549 to 6,538,451 _5721 Pf6N2E2_5722 - 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) ## LSU rRNA m(5)U1939, at 6,538,451 to 6,539,821 _5722 Position (kb) 6537 6538 6539Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 6536.627 kb on + strandat 6536.627 kb on + strandat 6536.627 kb on + strandat 6536.627 kb on + strandat 6536.627 kb on + strandat 6536.627 kb on + strandat 6536.628 kb on - strandat 6536.628 kb on - strandat 6536.628 kb on - strandat 6536.628 kb on - strandat 6536.641 kb on - strandat 6536.667 kb on + strandat 6536.694 kb on + strandat 6536.708 kb on + strandat 6536.708 kb on + strandat 6536.709 kb on - strandat 6536.709 kb on - strandat 6536.814 kb on + strandat 6536.814 kb on + strandat 6536.815 kb on - strandat 6536.839 kb on - strandat 6536.865 kb on - strandat 6536.896 kb on + strandat 6536.897 kb on - strandat 6536.897 kb on - strandat 6536.932 kb on + strandat 6536.932 kb on + strandat 6536.932 kb on + strandat 6536.932 kb on + strandat 6536.932 kb on + strandat 6536.932 kb on + strandat 6536.933 kb on - strandat 6536.933 kb on - strandat 6536.933 kb on - strandat 6536.936 kb on + strandat 6536.936 kb on + strandat 6536.936 kb on + strandat 6536.937 kb on - strandat 6536.937 kb on - strandat 6536.937 kb on - strandat 6536.937 kb on - strandat 6536.937 kb on - strandat 6536.937 kb on - strandat 6536.937 kb on - strandat 6536.937 kb on - strandat 6536.978 kb on + strandat 6536.978 kb on + strandat 6536.978 kb on + strandat 6537.016 kb on + strandat 6537.017 kb on - strandat 6537.017 kb on - strandat 6537.026 kb on + strandat 6537.065 kb on + strandat 6537.065 kb on + strandat 6537.066 kb on - strandat 6537.066 kb on - strandat 6537.069 kb on + strandat 6537.069 kb on + strandat 6537.069 kb on + strandat 6537.069 kb on + strandat 6537.070 kb on - strandat 6537.070 kb on - strandat 6537.089 kb on + strandat 6537.090 kb on - strandat 6537.097 kb on + strandat 6537.097 kb on + strandat 6537.097 kb on + strandat 6537.097 kb on + strandat 6537.097 kb on + strandat 6537.098 kb on - strandat 6537.098 kb on - strandat 6537.098 kb on - strandat 6537.099 kb on + strandat 6537.099 kb on + strandat 6537.099 kb on + strandat 6537.099 kb on + strandat 6537.099 kb on + strandat 6537.099 kb on + strandat 6537.099 kb on + strandat 6537.099 kb on + strandat 6537.099 kb on + strandat 6537.099 kb on + strandat 6537.099 kb on + strandat 6537.099 kb on + strandat 6537.099 kb on + strandat 6537.099 kb on + strandat 6537.099 kb on + strandat 6537.099 kb on + strandat 6537.099 kb on + strandat 6537.099 kb on + strandat 6537.099 kb on + strandat 6537.099 kb on + strandat 6537.099 kb on + strandat 6537.099 kb on + strandat 6537.099 kb on + strandat 6537.099 kb on + strandat 6537.099 kb on + strandat 6537.099 kb on + strandat 6537.100 kb on - strandat 6537.100 kb on - strandat 6537.100 kb on - strandat 6537.100 kb on - strandat 6537.100 kb on - strandat 6537.100 kb on - strandat 6537.100 kb on - strandat 6537.100 kb on - strandat 6537.100 kb on - strandat 6537.100 kb on - strandat 6537.100 kb on - strandat 6537.100 kb on - strandat 6537.100 kb on - strandat 6537.101 kb on + strandat 6537.101 kb on + strandat 6537.101 kb on + strandat 6537.101 kb on + strandat 6537.101 kb on + strandat 6537.101 kb on + strandat 6537.101 kb on + strandat 6537.101 kb on + strandat 6537.101 kb on + strandat 6537.101 kb on + strandat 6537.101 kb on + strandat 6537.101 kb on + strandat 6537.101 kb on + strandat 6537.101 kb on + strandat 6537.101 kb on + strandat 6537.101 kb on + strandat 6537.101 kb on + strandat 6537.101 kb on + strandat 6537.101 kb on + strandat 6537.101 kb on + strandat 6537.101 kb on + strandat 6537.101 kb on + strandat 6537.101 kb on + strandat 6537.101 kb on + strandat 6537.101 kb on + strandat 6537.101 kb on + strandat 6537.101 kb on + strandat 6537.101 kb on + strandat 6537.101 kb on + strandat 6537.102 kb on - strandat 6537.102 kb on - strandat 6537.102 kb on - strandat 6537.102 kb on - strandat 6537.102 kb on - strandat 6537.102 kb on - strandat 6537.102 kb on - strandat 6537.102 kb on - strandat 6537.102 kb on - strandat 6537.102 kb on - strandat 6537.177 kb on + strandat 6537.177 kb on + strandat 6537.177 kb on + strandat 6537.177 kb on + strandat 6537.177 kb on + strandat 6537.178 kb on - strandat 6537.229 kb on + strandat 6537.229 kb on + strandat 6537.230 kb on - strandat 6537.230 kb on - strandat 6537.230 kb on - strandat 6537.247 kb on + strandat 6537.247 kb on + strandat 6537.249 kb on + strandat 6537.249 kb on + strandat 6537.249 kb on + strandat 6537.249 kb on + strandat 6537.249 kb on + strandat 6537.249 kb on + strandat 6537.249 kb on + strandat 6537.249 kb on + strandat 6537.249 kb on + strandat 6537.250 kb on - strandat 6537.250 kb on - strandat 6537.250 kb on - strandat 6537.250 kb on - strandat 6537.250 kb on - strandat 6537.288 kb on + strandat 6537.288 kb on + strandat 6537.288 kb on + strandat 6537.288 kb on + strandat 6537.288 kb on + strandat 6537.288 kb on + strandat 6537.289 kb on - strandat 6537.289 kb on - strandat 6537.390 kb on + strandat 6537.390 kb on + strandat 6537.391 kb on - strandat 6537.391 kb on - strandat 6537.460 kb on - strandat 6537.460 kb on - strandat 6537.487 kb on + strandat 6537.510 kb on + strandat 6537.511 kb on - strandat 6537.515 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction molybdate 0.25 M
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6,536,627 + +1.2
6,536,627 + +0.1
6,536,627 + +0.6
6,536,627 + +0.1
6,536,627 + -0.5
6,536,627 + +0.4
6,536,628 - +1.1
6,536,628 - +1.3
6,536,628 - -1.8
6,536,628 - +0.1
6,536,641 - -0.5
6,536,667 + +0.0
6,536,694 + -0.4
6,536,708 + +0.5
6,536,708 + +1.5
6,536,709 - +0.2
6,536,709 - +0.4
6,536,814 + +0.8
6,536,814 + +0.6
6,536,815 - -1.9
6,536,839 - -1.5
6,536,865 - -1.3
6,536,896 + +0.5
6,536,897 - -1.3
6,536,897 - +0.2
6,536,932 + +0.4
6,536,932 + -1.5
6,536,932 + -0.5
6,536,932 + +0.0
6,536,932 + +0.0
6,536,932 + +1.4
6,536,933 - -1.1
6,536,933 - -0.2
6,536,933 - +1.4
6,536,936 + +1.0
6,536,936 + +0.8
6,536,936 + +0.0
6,536,937 - -0.3
6,536,937 - -1.2
6,536,937 - +1.8
6,536,937 - +0.7
6,536,937 - -1.9
6,536,937 - -1.2
6,536,937 - +1.0
6,536,937 - -2.5
6,536,978 + +0.3
6,536,978 + +0.6
6,536,978 + -0.2
6,537,016 + -0.2
6,537,017 - -1.9
6,537,017 - -2.3
6,537,026 + -0.4
6,537,065 + +0.2
6,537,065 + -0.3
6,537,066 - +0.7
6,537,066 - +0.0
6,537,069 + -0.3
6,537,069 + +0.8
6,537,069 + +0.3
6,537,069 + +0.1
6,537,070 - -2.0
6,537,070 - -3.1
6,537,089 + -0.0
6,537,090 - +1.0
6,537,097 + +0.9
6,537,097 + -1.2
6,537,097 + -0.4
6,537,097 + +0.6
6,537,097 + -0.7
6,537,098 - -1.1
6,537,098 - -1.0
6,537,098 - -1.0
6,537,099 + +0.2
6,537,099 + +0.9
6,537,099 + -0.2
6,537,099 + -0.2
6,537,099 + +0.6
6,537,099 + +0.1
6,537,099 + +1.9
6,537,099 + +0.2
6,537,099 + +1.2
6,537,099 + +1.1
6,537,099 + +2.2
6,537,099 + +2.4
6,537,099 + +0.1
6,537,099 + -0.1
6,537,099 + -0.4
6,537,099 + +0.5
6,537,099 + +0.2
6,537,099 + +0.8
6,537,099 + -0.6
6,537,099 + -1.4
6,537,099 + -0.1
6,537,099 + +0.8
6,537,099 + -2.6
6,537,099 + -0.1
6,537,099 + -0.9
6,537,099 + -1.5
6,537,100 - -2.6
6,537,100 - -0.1
6,537,100 - -1.8
6,537,100 - +0.6
6,537,100 - +0.4
6,537,100 - -1.8
6,537,100 - -1.9
6,537,100 - +0.0
6,537,100 - -2.0
6,537,100 - -0.1
6,537,100 - -0.8
6,537,100 - -1.4
6,537,100 - +0.7
6,537,101 + -0.9
6,537,101 + +1.8
6,537,101 + -0.2
6,537,101 + -0.3
6,537,101 + -2.7
6,537,101 + -0.4
6,537,101 + +0.8
6,537,101 + +0.7
6,537,101 + -0.4
6,537,101 + +0.7
6,537,101 + +0.1
6,537,101 + +1.1
6,537,101 + +0.9
6,537,101 + -1.3
6,537,101 + -1.0
6,537,101 + -0.0
6,537,101 + +0.7
6,537,101 + -0.8
6,537,101 + -1.6
6,537,101 + -0.0
6,537,101 + -0.3
6,537,101 + +0.3
6,537,101 + +0.8
6,537,101 + +0.8
6,537,101 + +0.4
6,537,101 + +0.1
6,537,101 + -0.9
6,537,101 + +0.2
6,537,101 + -0.2
6,537,102 - -0.9
6,537,102 - +0.2
6,537,102 - +0.7
6,537,102 - -0.4
6,537,102 - -1.3
6,537,102 - -1.0
6,537,102 - +0.4
6,537,102 - -0.8
6,537,102 - -0.2
6,537,102 - +0.5
6,537,177 + +1.2
6,537,177 + +0.7
6,537,177 + +0.5
6,537,177 + -1.1
6,537,177 + +0.4
6,537,178 - -1.7
6,537,229 + +0.2
6,537,229 + -0.8
6,537,230 - -0.3
6,537,230 - -1.6
6,537,230 - -0.4
6,537,247 + +0.4
6,537,247 + -0.7
6,537,249 + -0.2
6,537,249 + +0.1
6,537,249 + -1.3
6,537,249 + +0.2
6,537,249 + +0.1
6,537,249 + +0.7
6,537,249 + +1.1
6,537,249 + -0.6
6,537,249 + +0.2
6,537,250 - -0.8
6,537,250 - +0.7
6,537,250 - -0.8
6,537,250 - -1.5
6,537,250 - -2.5
6,537,288 + +0.2
6,537,288 + +1.4
6,537,288 + -1.0
6,537,288 + -0.2
6,537,288 + +1.5
6,537,288 + -0.0
6,537,289 - -0.2
6,537,289 - -0.7
6,537,390 + -0.6
6,537,390 + +0.7
6,537,391 - -0.2
6,537,391 - +0.7
6,537,460 - -0.5
6,537,460 - -1.1
6,537,487 + +0.9
6,537,510 + +1.0
6,537,511 - -0.8
6,537,515 + +0.2

Or see this region's nucleotide sequence