Experiment: molybdate 0.25 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_4961 and Pf6N2E2_4962 are separated by 11 nucleotides
Pf6N2E2_4961 - Threonine synthase (EC 4.2.3.1), at 5,721,252 to 5,722,616
_4961
Pf6N2E2_4962 - Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system, at 5,722,628 to 5,723,065
_4962
Position (kb)
5722
5723
5724 Strain fitness (log2 ratio)
-1
0
1
2 at 5721.741 kb on + strand, within Pf6N2E2_4961 at 5721.742 kb on - strand, within Pf6N2E2_4961 at 5721.933 kb on + strand, within Pf6N2E2_4961 at 5721.933 kb on + strand, within Pf6N2E2_4961 at 5721.934 kb on - strand, within Pf6N2E2_4961 at 5721.934 kb on - strand, within Pf6N2E2_4961 at 5721.934 kb on - strand, within Pf6N2E2_4961 at 5722.014 kb on + strand, within Pf6N2E2_4961 at 5722.014 kb on + strand, within Pf6N2E2_4961 at 5722.014 kb on + strand, within Pf6N2E2_4961 at 5722.015 kb on - strand, within Pf6N2E2_4961 at 5722.015 kb on - strand, within Pf6N2E2_4961 at 5722.117 kb on - strand, within Pf6N2E2_4961 at 5722.203 kb on + strand, within Pf6N2E2_4961 at 5722.203 kb on + strand, within Pf6N2E2_4961 at 5722.314 kb on + strand, within Pf6N2E2_4961 at 5722.315 kb on - strand, within Pf6N2E2_4961 at 5722.423 kb on - strand, within Pf6N2E2_4961 at 5722.787 kb on + strand, within Pf6N2E2_4962 at 5722.987 kb on + strand, within Pf6N2E2_4962 at 5722.987 kb on + strand, within Pf6N2E2_4962 at 5722.987 kb on + strand, within Pf6N2E2_4962 at 5722.988 kb on - strand, within Pf6N2E2_4962 at 5722.988 kb on - strand, within Pf6N2E2_4962 at 5722.988 kb on - strand, within Pf6N2E2_4962 at 5723.178 kb on + strand at 5723.178 kb on + strand at 5723.499 kb on + strand at 5723.499 kb on + strand at 5723.818 kb on + strand at 5723.818 kb on + strand at 5723.989 kb on + strand at 5723.989 kb on + strand at 5723.989 kb on + strand at 5723.989 kb on + strand at 5723.989 kb on + strand at 5723.989 kb on + strand at 5723.989 kb on + strand at 5723.990 kb on - strand at 5723.990 kb on - strand at 5723.990 kb on - strand at 5723.990 kb on - strand at 5724.009 kb on + strand at 5724.009 kb on + strand at 5724.009 kb on + strand at 5724.010 kb on - strand at 5724.010 kb on - strand at 5724.010 kb on - strand at 5724.010 kb on - strand at 5724.010 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction molybdate 0.25 M remove 5,721,741 + Pf6N2E2_4961 0.36 -0.2 5,721,742 - Pf6N2E2_4961 0.36 -0.1 5,721,933 + Pf6N2E2_4961 0.50 +1.9 5,721,933 + Pf6N2E2_4961 0.50 -0.1 5,721,934 - Pf6N2E2_4961 0.50 +0.8 5,721,934 - Pf6N2E2_4961 0.50 -1.3 5,721,934 - Pf6N2E2_4961 0.50 -0.3 5,722,014 + Pf6N2E2_4961 0.56 -0.4 5,722,014 + Pf6N2E2_4961 0.56 +0.7 5,722,014 + Pf6N2E2_4961 0.56 -0.0 5,722,015 - Pf6N2E2_4961 0.56 -0.6 5,722,015 - Pf6N2E2_4961 0.56 -1.0 5,722,117 - Pf6N2E2_4961 0.63 +1.0 5,722,203 + Pf6N2E2_4961 0.70 +0.1 5,722,203 + Pf6N2E2_4961 0.70 +0.4 5,722,314 + Pf6N2E2_4961 0.78 +0.4 5,722,315 - Pf6N2E2_4961 0.78 +0.4 5,722,423 - Pf6N2E2_4961 0.86 +0.8 5,722,787 + Pf6N2E2_4962 0.36 -0.9 5,722,987 + Pf6N2E2_4962 0.82 +1.4 5,722,987 + Pf6N2E2_4962 0.82 +0.6 5,722,987 + Pf6N2E2_4962 0.82 +1.4 5,722,988 - Pf6N2E2_4962 0.82 -0.5 5,722,988 - Pf6N2E2_4962 0.82 +1.3 5,722,988 - Pf6N2E2_4962 0.82 +0.6 5,723,178 + +0.2 5,723,178 + -0.6 5,723,499 + +0.8 5,723,499 + +0.8 5,723,818 + -0.7 5,723,818 + +0.1 5,723,989 + -1.0 5,723,989 + -1.0 5,723,989 + -1.4 5,723,989 + +1.6 5,723,989 + -0.5 5,723,989 + -0.8 5,723,989 + -1.2 5,723,990 - +0.9 5,723,990 - -1.7 5,723,990 - -0.2 5,723,990 - +0.6 5,724,009 + -0.8 5,724,009 + +0.9 5,724,009 + -1.1 5,724,010 - -0.8 5,724,010 - -0.7 5,724,010 - +0.4 5,724,010 - +0.2 5,724,010 - -0.0
Or see this region's nucleotide sequence