Experiment: molybdate 0.25 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_4310 and Pf6N2E2_4311 are separated by 104 nucleotides Pf6N2E2_4311 and Pf6N2E2_4312 overlap by 4 nucleotides Pf6N2E2_4312 and Pf6N2E2_4313 are separated by 209 nucleotides
Pf6N2E2_4310 - IcmF-related protein, at 5,025,752 to 5,029,195
_4310
Pf6N2E2_4311 - Protein serine/threonine phosphatase PrpC, regulation of stationary phase, at 5,029,300 to 5,029,917
_4311
Pf6N2E2_4312 - Serine/threonine protein kinase (EC 2.7.11.1), at 5,029,914 to 5,030,846
_4312
Pf6N2E2_4313 - hypothetical protein, at 5,031,056 to 5,031,415
_4313
Position (kb) 5029
5030
5031 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5 at 5028.922 kb on + strand at 5028.922 kb on + strand at 5028.961 kb on - strand at 5029.055 kb on + strand at 5029.115 kb on + strand at 5029.115 kb on + strand at 5029.116 kb on - strand at 5029.116 kb on - strand at 5029.116 kb on - strand at 5029.116 kb on - strand at 5029.116 kb on - strand at 5029.135 kb on + strand at 5029.213 kb on + strand at 5029.214 kb on - strand at 5029.254 kb on + strand at 5029.255 kb on - strand at 5029.255 kb on - strand at 5029.562 kb on - strand, within Pf6N2E2_4311 at 5029.562 kb on - strand, within Pf6N2E2_4311 at 5029.562 kb on - strand, within Pf6N2E2_4311 at 5029.585 kb on + strand, within Pf6N2E2_4311 at 5029.585 kb on + strand, within Pf6N2E2_4311 at 5029.585 kb on + strand, within Pf6N2E2_4311 at 5029.585 kb on + strand, within Pf6N2E2_4311 at 5029.585 kb on + strand, within Pf6N2E2_4311 at 5029.586 kb on - strand, within Pf6N2E2_4311 at 5029.586 kb on - strand, within Pf6N2E2_4311 at 5029.586 kb on - strand, within Pf6N2E2_4311 at 5029.586 kb on - strand, within Pf6N2E2_4311 at 5029.586 kb on - strand, within Pf6N2E2_4311 at 5029.780 kb on + strand, within Pf6N2E2_4311 at 5029.780 kb on + strand, within Pf6N2E2_4311 at 5029.780 kb on + strand, within Pf6N2E2_4311 at 5029.780 kb on + strand, within Pf6N2E2_4311 at 5029.780 kb on + strand, within Pf6N2E2_4311 at 5029.781 kb on - strand, within Pf6N2E2_4311 at 5029.941 kb on + strand at 5029.941 kb on + strand at 5029.941 kb on + strand at 5029.941 kb on + strand at 5029.942 kb on - strand at 5030.011 kb on + strand, within Pf6N2E2_4312 at 5030.011 kb on + strand, within Pf6N2E2_4312 at 5030.118 kb on + strand, within Pf6N2E2_4312 at 5030.119 kb on - strand, within Pf6N2E2_4312 at 5030.223 kb on - strand, within Pf6N2E2_4312 at 5030.235 kb on + strand, within Pf6N2E2_4312 at 5030.235 kb on + strand, within Pf6N2E2_4312 at 5030.236 kb on - strand, within Pf6N2E2_4312 at 5030.391 kb on + strand, within Pf6N2E2_4312 at 5030.392 kb on - strand, within Pf6N2E2_4312 at 5030.410 kb on + strand, within Pf6N2E2_4312 at 5030.410 kb on + strand, within Pf6N2E2_4312 at 5030.410 kb on + strand, within Pf6N2E2_4312 at 5030.614 kb on - strand, within Pf6N2E2_4312 at 5030.614 kb on - strand, within Pf6N2E2_4312 at 5030.634 kb on + strand, within Pf6N2E2_4312 at 5030.634 kb on + strand, within Pf6N2E2_4312 at 5030.634 kb on + strand, within Pf6N2E2_4312 at 5030.635 kb on - strand, within Pf6N2E2_4312 at 5030.635 kb on - strand, within Pf6N2E2_4312 at 5030.635 kb on - strand, within Pf6N2E2_4312 at 5030.635 kb on - strand, within Pf6N2E2_4312 at 5030.671 kb on + strand, within Pf6N2E2_4312 at 5030.793 kb on - strand at 5030.883 kb on + strand at 5030.883 kb on + strand at 5030.884 kb on - strand at 5030.884 kb on - strand at 5030.884 kb on - strand at 5030.974 kb on + strand at 5030.974 kb on + strand at 5031.309 kb on + strand, within Pf6N2E2_4313 at 5031.309 kb on + strand, within Pf6N2E2_4313 at 5031.309 kb on + strand, within Pf6N2E2_4313 at 5031.309 kb on + strand, within Pf6N2E2_4313 at 5031.309 kb on + strand, within Pf6N2E2_4313 at 5031.309 kb on + strand, within Pf6N2E2_4313 at 5031.309 kb on + strand, within Pf6N2E2_4313 at 5031.309 kb on + strand, within Pf6N2E2_4313 at 5031.309 kb on + strand, within Pf6N2E2_4313 at 5031.309 kb on + strand, within Pf6N2E2_4313 at 5031.309 kb on + strand, within Pf6N2E2_4313 at 5031.310 kb on - strand, within Pf6N2E2_4313 at 5031.310 kb on - strand, within Pf6N2E2_4313 at 5031.310 kb on - strand, within Pf6N2E2_4313 at 5031.310 kb on - strand, within Pf6N2E2_4313 at 5031.310 kb on - strand, within Pf6N2E2_4313 at 5031.310 kb on - strand, within Pf6N2E2_4313 at 5031.310 kb on - strand, within Pf6N2E2_4313 at 5031.310 kb on - strand, within Pf6N2E2_4313 at 5031.312 kb on + strand, within Pf6N2E2_4313 at 5031.312 kb on + strand, within Pf6N2E2_4313 at 5031.403 kb on + strand at 5031.404 kb on - strand at 5031.479 kb on + strand at 5031.480 kb on - strand at 5031.480 kb on - strand at 5031.548 kb on + strand at 5031.548 kb on + strand at 5031.553 kb on + strand at 5031.553 kb on + strand at 5031.553 kb on + strand at 5031.553 kb on + strand at 5031.553 kb on + strand at 5031.553 kb on + strand at 5031.553 kb on + strand at 5031.553 kb on + strand at 5031.553 kb on + strand at 5031.554 kb on - strand at 5031.554 kb on - strand at 5031.554 kb on - strand at 5031.554 kb on - strand at 5031.554 kb on - strand at 5031.554 kb on - strand at 5031.554 kb on - strand at 5031.554 kb on - strand at 5031.554 kb on - strand at 5031.554 kb on - strand at 5031.585 kb on + strand at 5031.585 kb on + strand at 5031.585 kb on + strand at 5031.585 kb on + strand at 5031.585 kb on + strand at 5031.585 kb on + strand at 5031.585 kb on + strand at 5031.585 kb on + strand at 5031.586 kb on - strand at 5031.660 kb on + strand at 5031.702 kb on + strand at 5031.708 kb on + strand at 5031.708 kb on + strand at 5031.730 kb on + strand at 5031.730 kb on + strand at 5031.730 kb on + strand at 5031.730 kb on + strand at 5031.731 kb on - strand at 5031.731 kb on - strand at 5031.731 kb on - strand at 5031.775 kb on - strand at 5031.775 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction molybdate 0.25 M remove 5,028,922 + +0.9 5,028,922 + -0.0 5,028,961 - -0.5 5,029,055 + -1.7 5,029,115 + -1.2 5,029,115 + -1.3 5,029,116 - +0.1 5,029,116 - -2.3 5,029,116 - +0.1 5,029,116 - -0.4 5,029,116 - -0.2 5,029,135 + +0.4 5,029,213 + -0.0 5,029,214 - +0.8 5,029,254 + -1.1 5,029,255 - +0.6 5,029,255 - +0.4 5,029,562 - Pf6N2E2_4311 0.42 -0.6 5,029,562 - Pf6N2E2_4311 0.42 -0.7 5,029,562 - Pf6N2E2_4311 0.42 +0.9 5,029,585 + Pf6N2E2_4311 0.46 -0.2 5,029,585 + Pf6N2E2_4311 0.46 -0.3 5,029,585 + Pf6N2E2_4311 0.46 +2.6 5,029,585 + Pf6N2E2_4311 0.46 +0.7 5,029,585 + Pf6N2E2_4311 0.46 +1.3 5,029,586 - Pf6N2E2_4311 0.46 -0.7 5,029,586 - Pf6N2E2_4311 0.46 -0.1 5,029,586 - Pf6N2E2_4311 0.46 -1.2 5,029,586 - Pf6N2E2_4311 0.46 -0.5 5,029,586 - Pf6N2E2_4311 0.46 -0.2 5,029,780 + Pf6N2E2_4311 0.78 +0.5 5,029,780 + Pf6N2E2_4311 0.78 -2.6 5,029,780 + Pf6N2E2_4311 0.78 -0.6 5,029,780 + Pf6N2E2_4311 0.78 +0.9 5,029,780 + Pf6N2E2_4311 0.78 +1.1 5,029,781 - Pf6N2E2_4311 0.78 +0.0 5,029,941 + -0.2 5,029,941 + +0.1 5,029,941 + -0.2 5,029,941 + +0.3 5,029,942 - -0.6 5,030,011 + Pf6N2E2_4312 0.10 +0.1 5,030,011 + Pf6N2E2_4312 0.10 +1.0 5,030,118 + Pf6N2E2_4312 0.22 -0.3 5,030,119 - Pf6N2E2_4312 0.22 +0.4 5,030,223 - Pf6N2E2_4312 0.33 +0.2 5,030,235 + Pf6N2E2_4312 0.34 -0.9 5,030,235 + Pf6N2E2_4312 0.34 +0.4 5,030,236 - Pf6N2E2_4312 0.35 +2.4 5,030,391 + Pf6N2E2_4312 0.51 -1.0 5,030,392 - Pf6N2E2_4312 0.51 -0.1 5,030,410 + Pf6N2E2_4312 0.53 +0.9 5,030,410 + Pf6N2E2_4312 0.53 -0.5 5,030,410 + Pf6N2E2_4312 0.53 +1.4 5,030,614 - Pf6N2E2_4312 0.75 +0.3 5,030,614 - Pf6N2E2_4312 0.75 -0.2 5,030,634 + Pf6N2E2_4312 0.77 +2.4 5,030,634 + Pf6N2E2_4312 0.77 -0.8 5,030,634 + Pf6N2E2_4312 0.77 -0.0 5,030,635 - Pf6N2E2_4312 0.77 -0.1 5,030,635 - Pf6N2E2_4312 0.77 +0.4 5,030,635 - Pf6N2E2_4312 0.77 -1.3 5,030,635 - Pf6N2E2_4312 0.77 +0.0 5,030,671 + Pf6N2E2_4312 0.81 -1.1 5,030,793 - +1.0 5,030,883 + +0.1 5,030,883 + -0.2 5,030,884 - -1.1 5,030,884 - -1.4 5,030,884 - +0.1 5,030,974 + +2.0 5,030,974 + +1.6 5,031,309 + Pf6N2E2_4313 0.70 -0.1 5,031,309 + Pf6N2E2_4313 0.70 -0.4 5,031,309 + Pf6N2E2_4313 0.70 -0.3 5,031,309 + Pf6N2E2_4313 0.70 -1.2 5,031,309 + Pf6N2E2_4313 0.70 +1.5 5,031,309 + Pf6N2E2_4313 0.70 +1.0 5,031,309 + Pf6N2E2_4313 0.70 +0.3 5,031,309 + Pf6N2E2_4313 0.70 +1.4 5,031,309 + Pf6N2E2_4313 0.70 +0.7 5,031,309 + Pf6N2E2_4313 0.70 +0.2 5,031,309 + Pf6N2E2_4313 0.70 -1.8 5,031,310 - Pf6N2E2_4313 0.71 +0.0 5,031,310 - Pf6N2E2_4313 0.71 -0.2 5,031,310 - Pf6N2E2_4313 0.71 +0.2 5,031,310 - Pf6N2E2_4313 0.71 -0.1 5,031,310 - Pf6N2E2_4313 0.71 -0.6 5,031,310 - Pf6N2E2_4313 0.71 -0.7 5,031,310 - Pf6N2E2_4313 0.71 +1.0 5,031,310 - Pf6N2E2_4313 0.71 +1.0 5,031,312 + Pf6N2E2_4313 0.71 +0.2 5,031,312 + Pf6N2E2_4313 0.71 +1.4 5,031,403 + +1.0 5,031,404 - +0.6 5,031,479 + +1.4 5,031,480 - +5.2 5,031,480 - +1.4 5,031,548 + -0.5 5,031,548 + +0.3 5,031,553 + +0.4 5,031,553 + -0.9 5,031,553 + -0.3 5,031,553 + -0.6 5,031,553 + +1.0 5,031,553 + +1.0 5,031,553 + -1.2 5,031,553 + +1.1 5,031,553 + +0.2 5,031,554 - -1.1 5,031,554 - +0.4 5,031,554 - +0.7 5,031,554 - +0.5 5,031,554 - -0.8 5,031,554 - +0.0 5,031,554 - -1.0 5,031,554 - -1.2 5,031,554 - -2.8 5,031,554 - +0.1 5,031,585 + +0.8 5,031,585 + -0.2 5,031,585 + -0.0 5,031,585 + +0.0 5,031,585 + -0.3 5,031,585 + +0.2 5,031,585 + -0.5 5,031,585 + +1.2 5,031,586 - -0.8 5,031,660 + -1.0 5,031,702 + +2.9 5,031,708 + +0.1 5,031,708 + +0.7 5,031,730 + +0.5 5,031,730 + +1.0 5,031,730 + +0.5 5,031,730 + +0.3 5,031,731 - -0.4 5,031,731 - -0.5 5,031,731 - -0.0 5,031,775 - -0.0 5,031,775 - -0.5
Or see this region's nucleotide sequence