Experiment: molybdate 0.25 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_4144 and Pf6N2E2_4145 are separated by 1 nucleotides Pf6N2E2_4145 and Pf6N2E2_4146 overlap by 4 nucleotides Pf6N2E2_4146 and Pf6N2E2_4147 are separated by 4 nucleotides
Pf6N2E2_4144 - ABC transporter ATP-binding protein USSDB6B, at 4,824,400 to 4,825,203
_4144
Pf6N2E2_4145 - ABC-type transport system involved in resistance to organic solvents, periplasmic component USSDB6C, at 4,825,205 to 4,826,143
_4145
Pf6N2E2_4146 - Membrane lipoprotein lipid attachment site containing protein USSDB6D, at 4,826,140 to 4,826,772
_4146
Pf6N2E2_4147 - Fused spore maturation proteins A and B, at 4,826,777 to 4,828,006
_4147
Position (kb)
4826
4827 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4825.141 kb on + strand at 4825.141 kb on + strand at 4825.142 kb on - strand at 4825.142 kb on - strand at 4825.142 kb on - strand at 4825.142 kb on - strand at 4825.142 kb on - strand at 4825.142 kb on - strand at 4825.322 kb on + strand, within Pf6N2E2_4145 at 4825.322 kb on + strand, within Pf6N2E2_4145 at 4825.380 kb on - strand, within Pf6N2E2_4145 at 4825.999 kb on + strand, within Pf6N2E2_4145 at 4826.103 kb on - strand at 4826.160 kb on + strand at 4826.170 kb on - strand at 4826.177 kb on + strand at 4826.242 kb on + strand, within Pf6N2E2_4146 at 4826.242 kb on + strand, within Pf6N2E2_4146 at 4826.383 kb on + strand, within Pf6N2E2_4146 at 4826.756 kb on + strand at 4826.793 kb on + strand at 4826.793 kb on + strand at 4826.889 kb on + strand at 4826.889 kb on + strand at 4826.889 kb on + strand at 4826.889 kb on + strand at 4826.889 kb on + strand at 4826.889 kb on + strand at 4826.890 kb on - strand at 4826.904 kb on + strand, within Pf6N2E2_4147 at 4826.904 kb on + strand, within Pf6N2E2_4147 at 4826.904 kb on + strand, within Pf6N2E2_4147 at 4826.905 kb on - strand, within Pf6N2E2_4147 at 4826.905 kb on - strand, within Pf6N2E2_4147 at 4826.905 kb on - strand, within Pf6N2E2_4147 at 4827.080 kb on + strand, within Pf6N2E2_4147 at 4827.080 kb on + strand, within Pf6N2E2_4147 at 4827.080 kb on + strand, within Pf6N2E2_4147 at 4827.081 kb on - strand, within Pf6N2E2_4147 at 4827.081 kb on - strand, within Pf6N2E2_4147 at 4827.081 kb on - strand, within Pf6N2E2_4147 at 4827.081 kb on - strand, within Pf6N2E2_4147 at 4827.225 kb on + strand, within Pf6N2E2_4147 at 4827.225 kb on + strand, within Pf6N2E2_4147 at 4827.225 kb on + strand, within Pf6N2E2_4147 at 4827.225 kb on + strand, within Pf6N2E2_4147 at 4827.226 kb on - strand, within Pf6N2E2_4147 at 4827.387 kb on + strand, within Pf6N2E2_4147 at 4827.387 kb on + strand, within Pf6N2E2_4147 at 4827.388 kb on - strand, within Pf6N2E2_4147 at 4827.388 kb on - strand, within Pf6N2E2_4147 at 4827.528 kb on + strand, within Pf6N2E2_4147 at 4827.528 kb on + strand, within Pf6N2E2_4147 at 4827.529 kb on - strand, within Pf6N2E2_4147 at 4827.529 kb on - strand, within Pf6N2E2_4147 at 4827.529 kb on - strand, within Pf6N2E2_4147 at 4827.529 kb on - strand, within Pf6N2E2_4147
Per-strain Table
Position Strand Gene LocusTag Fraction molybdate 0.25 M remove 4,825,141 + -1.2 4,825,141 + +0.2 4,825,142 - -0.7 4,825,142 - +0.9 4,825,142 - -1.2 4,825,142 - +0.1 4,825,142 - -0.2 4,825,142 - -0.2 4,825,322 + Pf6N2E2_4145 0.12 -0.4 4,825,322 + Pf6N2E2_4145 0.12 -0.7 4,825,380 - Pf6N2E2_4145 0.19 +2.1 4,825,999 + Pf6N2E2_4145 0.85 -0.1 4,826,103 - +0.3 4,826,160 + -0.5 4,826,170 - +0.5 4,826,177 + -0.3 4,826,242 + Pf6N2E2_4146 0.16 -1.9 4,826,242 + Pf6N2E2_4146 0.16 -0.8 4,826,383 + Pf6N2E2_4146 0.38 -0.5 4,826,756 + -0.7 4,826,793 + -1.7 4,826,793 + +0.3 4,826,889 + +0.0 4,826,889 + -1.6 4,826,889 + +1.0 4,826,889 + +0.7 4,826,889 + -2.2 4,826,889 + +0.2 4,826,890 - -1.0 4,826,904 + Pf6N2E2_4147 0.10 +0.6 4,826,904 + Pf6N2E2_4147 0.10 -2.5 4,826,904 + Pf6N2E2_4147 0.10 -0.3 4,826,905 - Pf6N2E2_4147 0.10 -2.2 4,826,905 - Pf6N2E2_4147 0.10 +0.9 4,826,905 - Pf6N2E2_4147 0.10 -0.1 4,827,080 + Pf6N2E2_4147 0.25 -0.2 4,827,080 + Pf6N2E2_4147 0.25 -0.1 4,827,080 + Pf6N2E2_4147 0.25 +0.7 4,827,081 - Pf6N2E2_4147 0.25 +1.1 4,827,081 - Pf6N2E2_4147 0.25 +1.4 4,827,081 - Pf6N2E2_4147 0.25 -0.5 4,827,081 - Pf6N2E2_4147 0.25 +0.3 4,827,225 + Pf6N2E2_4147 0.36 +1.6 4,827,225 + Pf6N2E2_4147 0.36 +0.6 4,827,225 + Pf6N2E2_4147 0.36 -0.5 4,827,225 + Pf6N2E2_4147 0.36 -1.7 4,827,226 - Pf6N2E2_4147 0.37 -2.7 4,827,387 + Pf6N2E2_4147 0.50 +0.5 4,827,387 + Pf6N2E2_4147 0.50 -0.3 4,827,388 - Pf6N2E2_4147 0.50 -0.0 4,827,388 - Pf6N2E2_4147 0.50 +0.3 4,827,528 + Pf6N2E2_4147 0.61 -0.5 4,827,528 + Pf6N2E2_4147 0.61 +0.1 4,827,529 - Pf6N2E2_4147 0.61 +0.7 4,827,529 - Pf6N2E2_4147 0.61 +0.9 4,827,529 - Pf6N2E2_4147 0.61 -0.5 4,827,529 - Pf6N2E2_4147 0.61 -0.7
Or see this region's nucleotide sequence